ncRNA ID | novel_zma_miR5760 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:2604789-2604985 [-] |
Reference genome | RefGen_v4 |
Source | SRR2647221 |
Length | 24 |
Mature sequence(if miRNA) | 174 - UUUCUACGGCCUACUCUAGGAAGU - 197 |
Stem-loop(if miRNA) |
--      C    UAC  -                -AG   -   A    C     UAGUCAAA GAAAGCUAACUUUCUACGGCCGGCUCUAGGAAGUUAG   UUUCUA GGCC   UC UAGGAAGUUAGAUUUU   UUG CUG UCCA GGUUG        C                                     C   |||||| ||||   || ||||||||||||||||   ||| ||| |||| |||||        |   AAGGAU UCGG   AG AUCCUUCAAUCUAAAA   AAC GAU AGGU UCGAC        A                                     A UG      C    -CC  C                GCA   U   C    U     ---UUUAU UUGAAGGAUGUCCUCCGGCAUCUUUUAAUCGACAGGU |
Stem-loop sequence | UUUCUACGGCCUACUCUAGGAAGUUAGAUUUUAGUUGCUGAUCCACGGUUGUAGUCAAACGAAAGCUAACUUUCUACGGCCGGCUCUAGGAAGUUAGCAUGGACAGCUAAUUUUCUACGGCCUCCUGUAGGAAGUUAUAUUUCAGCUUUGGACUAGUCAAACGAAAAUCUAACUUCCUACGACCGGCUCUAGGAAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU949881.1 |
|
1.5 | Zea mays clone 450754 mRNA sequence | NA | coding protein | psRNATarget |