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BaseInfo

ncRNA ID	novel_zma_miR5759
Species	Zea mays
Class	miRNA
Genome position	Chr10:127569462-127569558 [+]
Reference genome	RefGen_v4
Source	SRR2647221
Length	24
Mature sequence(if miRNA)	1 - ACGAAUUUAUUAAGUCUAAUUAAU - 24
Stem-loop(if miRNA)	--                      AU       -  -A  A   UCUCC   ACGAAUUUAUUAAGUCUAAUUA  CUAUAAU CA  CA AUA     U   ||||||||||||||||||||||  ||||||| ||  || |||     G   UGCUUGGAUAAUUCGGAUUAAU  GGUAUUA GU  GU UAU     C UU                      CU       A  AG  A   UACGA
Stem-loop sequence	ACGAAUUUAUUAAGUCUAAUUAAUCUAUAAUCAACAAAUAUCUCCUGCAGCAUUAUAUGGAUGAAUUAUGGUCUAAUUAGGCUUAAUAGGUUCGUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020537836.1	ncRNA:24   UAAUUAAUCUGAAUUAUUUAAGCA   1   |||||||||==||||||||||||| targets:447   AUUAAUUAGGUUUAAUAAAUUCGU   470 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103625804 (LOC103625804), mRNA	NA	coding protein	psRNATarget
BT033512.1	ncRNA:24   UAAUUAAUCUGAAUUAUUUAAGCA   1   *|||||||||=||||||||||=|| targets:2298   UUUAAUUAGAUUUAAUAAAUUUGU   2321 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0200O13 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001136859.1	ncRNA:24   UAAUUAAUCUGAAUUAUUUAAGCA   1   *|||||||||=||||||||||=|| targets:2298   UUUAAUUAGAUUUAAUAAAUUUGU   2321 Target Full Sequence	2.5	Zea mays Ubiquitin fusion degradation UFD1 family protein (AY110113), mRNA	NA	coding protein	psRNATarget
EU943817.1	ncRNA:24   UAAUUAAUCUGAAUUAUUUAAGCA   1   *|||||||||=||||*|||||||| targets:31   CUUAAUUAGAUUUAACAAAUUCGU   54 Target Full Sequence	2.5	Zea mays clone 1688509 mRNA sequence	NA	coding protein	psRNATarget
EZ068830.1	ncRNA:24   UAAUUAAUCUGAAUUAUUUAAGCA   1   *||||||||*=||||||||||||| targets:95   CUUAAUUAGUUUUAAUAAAUUCGU   118 Target Full Sequence	2.0	TSA: Zea mays contig04465, mRNA sequence	NA	coding protein	psRNATarget
BT088020.1	ncRNA:24   UAAUUAAUCUGAAUUAUUUAAGCA   1   |*||||||||=||||||*|||||| targets:1811   ACUAAUUAGAUUUAAUAUAUUCGU   1834 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0358M05 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020553411.1	ncRNA:24   UAAUUAAUCUGAAUUAUUUAAGCA   1   |*||||||||=||||||*|||||| targets:1196   ACUAAUUAGAUUUAAUAUAUUCGU   1219 Target Full Sequence	2.5	PREDICTED: Zea mays nitrate-induced NOI protein (LOC100285658), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020553410.1	ncRNA:24   UAAUUAAUCUGAAUUAUUUAAGCA   1   |*||||||||=||||||*|||||| targets:1194   ACUAAUUAGAUUUAAUAUAUUCGU   1217 Target Full Sequence	2.5	PREDICTED: Zea mays nitrate-induced NOI protein (LOC100285658), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020553409.1	ncRNA:24   UAAUUAAUCUGAAUUAUUUAAGCA   1   |*||||||||=||||||*|||||| targets:1276   ACUAAUUAGAUUUAAUAUAUUCGU   1299 Target Full Sequence	2.5	PREDICTED: Zea mays nitrate-induced NOI protein (LOC100285658), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT068585.1	ncRNA:24   UAAUUAAUCUGAAUUAUUUAAGCA   1   |*||||||||=||||||*|||||| targets:871   ACUAAUUAGAUUUAAUAUAUUCGU   894 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0336C10 mRNA, complete cds	NA	coding protein	psRNATarget