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BaseInfo

ncRNA ID novel_zma_miR5757
Species Zea mays
Class miRNA
Genome position Chr5:6115786-6115842 [-]
Reference genome RefGen_v4
Source SRR2647221
Length 24
Mature sequence(if miRNA) 1 - UUCCUCUGGGAAAAUAAAAAUCCC - 24
Stem-loop(if miRNA) --    CC          AG     AUA
  GAUU  UAUUUUCCCA  GGAAA   A
  ||||  ||||||||||  |||||   A
  CUAA  AUAAAAGGGU  CCUUU   C
CC    AA          CU     AAU
Stem-loop sequence GAUUCCUAUUUUCCCAAGGGAAAAUAAACUAAUUUCCUCUGGGAAAAUAAAAAUCCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
DQ246015.1
ncRNA:24   CCCUAAAAAUAAAAGGGUCUCCUU   1
  ***=*|||||||*|||||||||||
targets:454   CCAGCUUUUAUUGUCCCAGAGGAA   477

1.5 Zea mays clone 94683 mRNA sequence NA coding protein psRNATarget