ncRNA ID | novel_zma_miR5744 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:217649838-217649916 [-] |
Reference genome | RefGen_v4 |
Source | SRR2647221 |
Length | 23 |
Mature sequence(if miRNA) | 57 - GGUCAAAUGAUGUUAGAAUUGUU - 79 |
Stem-loop(if miRNA) |
--      AU       G   UG U   U    U     U   GGUCAA  GAUGUUA AAU  U UAA AUCU UAAUU A   ||||||  ||||||| |||  | ||| |||| ||||| G   UUAGUU  UUAUAAU UUA  G AUU UAGG AUUGA U UU      --       G   GU U   U    U     A |
Stem-loop sequence | GGUCAAAUGAUGUUAGAAUUGUUUAAUAUCUUUAAUUUAGUAAGUUAUGGAUUUUAUGUGAUUGUAAUAUUUUGAUUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008683131.2 |
|
2.5 | PREDICTED: Zea mays chaperone protein dnaJ (LOC100272398), transcript variant X1, mRNA | NA | coding protein | psRNATarget |