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BaseInfo

ncRNA ID	novel_zma_miR5742
Species	Zea mays
Class	miRNA
Genome position	Chr5:219017623-219017706 [-]
Reference genome	RefGen_v4
Source	SRR2647221
Length	24
Mature sequence(if miRNA)	61 - ACUCCAUCCGUUUCUUUUUAUUUG - 84
Stem-loop(if miRNA)	--     A          UU   U       GAG    UUAA   ACUCC UCCGUUUCUU  UAU UGUCGUC   UAGU    A   ||||| ||||||||||  ||| |||||||   ||||   UGAGG AGGCAAGGAA  AUA ACAGCAG   AUCA    U UA     G          UU   U       GCA    UGUU
Stem-loop sequence	ACUCCAUCCGUUUCUUUUUAUUUGUCGUCGAGUAGUUUAAAUUUGUACUAACGGACGACAUAUAUUAAGGAACGGAGGGAGUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ241075.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:63   CAAAUAAAAAGAAACGGAGGGAGU   86 Target Full Sequence	1.5	Sequence 7070 from Patent EP2985353	NA	coding protein	psRNATarget
LQ242091.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:63   CAAAUAAAAAGAAACGGAGGGAGU   86 Target Full Sequence	1.5	Sequence 8086 from Patent EP2985353	NA	coding protein	psRNATarget
LQ240748.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:63   CAAAUAAAAAGAAACGGAGGGAGU   86 Target Full Sequence	1.5	Sequence 6743 from Patent EP2985353	NA	coding protein	psRNATarget
HI409961.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:63   CAAAUAAAAAGAAACGGAGGGAGU   86 Target Full Sequence	1.5	Sequence 8086 from Patent EP2074227	NA	coding protein	psRNATarget
HI410015.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:63   CAAAUAAAAAGAAACGGAGGGAGU   86 Target Full Sequence	1.5	Sequence 8140 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242145.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:63   CAAAUAAAAAGAAACGGAGGGAGU   86 Target Full Sequence	1.5	Sequence 8140 from Patent EP2985353	NA	coding protein	psRNATarget
HI408618.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:63   CAAAUAAAAAGAAACGGAGGGAGU   86 Target Full Sequence	1.5	Sequence 6743 from Patent EP2074227	NA	coding protein	psRNATarget
JB170476.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:63   CAAAUAAAAAGAAACGGAGGGAGU   86 Target Full Sequence	1.5	Sequence 8140 from Patent EP2559767	NA	coding protein	psRNATarget
JB169406.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:63   CAAAUAAAAAGAAACGGAGGGAGU   86 Target Full Sequence	1.5	Sequence 7070 from Patent EP2559767	NA	coding protein	psRNATarget
JB169079.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:63   CAAAUAAAAAGAAACGGAGGGAGU   86 Target Full Sequence	1.5	Sequence 6743 from Patent EP2559767	NA	coding protein	psRNATarget
HI408945.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:63   CAAAUAAAAAGAAACGGAGGGAGU   86 Target Full Sequence	1.5	Sequence 7070 from Patent EP2074227	NA	coding protein	psRNATarget
JB170422.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:63   CAAAUAAAAAGAAACGGAGGGAGU   86 Target Full Sequence	1.5	Sequence 8086 from Patent EP2559767	NA	coding protein	psRNATarget
EZ067019.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:6   CAAAUAAAAAGAAACGGAGGGAGU   29 Target Full Sequence	1.5	TSA: Zea mays contig02653, mRNA sequence	NA	coding protein	psRNATarget
EU964901.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:556   CAAAUAAAAAGAAACGGAGGGAGU   579 Target Full Sequence	1.5	Zea mays clone 282450 mRNA sequence	NA	coding protein	psRNATarget
EU974849.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:628   CAAAUAAAAAGAAACGGAGGGAGU   651 Target Full Sequence	1.5	Zea mays clone 459794 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001151882.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:628   CAAAUAAAAAGAAACGGAGGGAGU   651 Target Full Sequence	1.5	Zea mays uncharacterized LOC100278686 (LOC100278686), mRNA	NA	coding protein	psRNATarget
BT060817.2	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:289   CAAAUAAAAAGAAACGGAGGGAGU   312 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0054B23 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008671993.2	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:1225   CAAAUAAAAAGAAACGGAGGGAGU   1248 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X2, mRNA	NA	coding protein	psRNATarget
NM_001156655.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:1347   CAAAUAAAAAGAAACGGAGGGAGU   1370 Target Full Sequence	1.5	Zea mays wax synthase (LOC100283756), mRNA	NA	coding protein	psRNATarget
EU965844.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:1347   CAAAUAAAAAGAAACGGAGGGAGU   1370 Target Full Sequence	1.5	Zea mays clone 289333 wax synthase isoform 3 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008647346.2	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:200   CAAAUAAAAAGAAACGGAGGGAGU   223 Target Full Sequence	1.5	PREDICTED: Zea mays E3 ubiquitin-protein ligase Os03g0188200 (LOC103626988), mRNA	NA	coding protein	psRNATarget
XM_008651544.2	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:1414   CAAAUAAAAAGAAACGGAGGGAGU   1437 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008671992.2	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:1331   CAAAUAAAAAGAAACGGAGGGAGU   1354 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT043433.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:1404   CAAAUAAAAAGAAACGGAGGGAGU   1427 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0188B19 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008677073.2	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:1586   CAAAUAAAAAGAAACGGAGGGAGU   1609 Target Full Sequence	1.5	PREDICTED: Zea mays probable glycosyltransferase At5g03795 (LOC103651446), mRNA	NA	coding protein	psRNATarget
NM_001148943.2	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:1602   CAAAUAAAAAGAAACGGAGGGAGU   1625 Target Full Sequence	1.5	Zea mays uncharacterized LOC100274590 (LOC100274590), mRNA	NA	coding protein	psRNATarget
NM_001196908.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:813   CAAAUAAAAAGAAACGGAAGGAGU   836 Target Full Sequence	1.5	Zea mays uncharacterized LOC100502430 (LOC100502430), mRNA	NA	coding protein	psRNATarget
BT088136.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:813   CAAAUAAAAAGAAACGGAAGGAGU   836 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0030P23 mRNA, complete cds	NA	coding protein	psRNATarget
EU957018.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:2059   CAAAUAAAAAGAAACGGAGGGAGU   2082 Target Full Sequence	1.5	Zea mays clone 1580670 cytochrome P450 CYP84A33v2 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001158152.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||*|||||||||||||||||||| targets:2172   CAACUAAAAAGAAACGGAUGGAGU   2195 Target Full Sequence	0.0	Zea mays cyclin-like F-box (LOC100285258), mRNA	NA	coding protein	psRNATarget
EU971439.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||*|||||||||||||||||||| targets:2172   CAACUAAAAAGAAACGGAUGGAGU   2195 Target Full Sequence	0.0	Zea mays clone 364738 cyclin-like F-box mRNA, complete cds	NA	coding protein	psRNATarget
XM_008651543.2	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:2555   CAAAUAAAAAGAAACGGAGGGAGU   2578 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020544250.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:2494   CAAAUAAAAAGAAACGGAGGGAGU   2517 Target Full Sequence	1.5	PREDICTED: Zea mays G-type lectin S-receptor-like serine/threonine-protein kinase B120 (LOC103638818), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020546173.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:1522   CAAAUAAAAAGAAACGGAGGGAGU   1545 Target Full Sequence	1.5	PREDICTED: Zea mays myb-related protein P-like (LOC109943268), mRNA	NA	coding protein	psRNATarget
XM_020546615.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:2855   CAAAUAAAAAGAAACGGAGGGAGU   2878 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020546614.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:2872   CAAAUAAAAAGAAACGGAGGGAGU   2895 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020546612.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:2978   CAAAUAAAAAGAAACGGAGGGAGU   3001 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020546613.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||||||||||*||||| targets:3757   CAAAUAAAAAGAAACGGAGGGAGU   3780 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X2, mRNA	NA	coding protein	psRNATarget
HI409699.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||=||||||||||||||*||||| targets:63   CAAGUAAAAAGAAACGGAGGGAGU   86 Target Full Sequence	1.5	Sequence 7824 from Patent EP2074227	NA	coding protein	psRNATarget
JB170160.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||=||||||||||||||*||||| targets:63   CAAGUAAAAAGAAACGGAGGGAGU   86 Target Full Sequence	1.5	Sequence 7824 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241829.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||=||||||||||||||*||||| targets:63   CAAGUAAAAAGAAACGGAGGGAGU   86 Target Full Sequence	1.5	Sequence 7824 from Patent EP2985353	NA	coding protein	psRNATarget
BT087390.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||*=|||||||||||| targets:429   CAAAUAAAAAAGAACGGAUGGAGU   452 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0059O03 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020539026.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||*=|||||||||||| targets:4576   CAAAUAAAAAAGAACGGAUGGAGU   4599 Target Full Sequence	2.5	PREDICTED: Zea mays DNA dependent RNA polymerase D largest subunit (LOC100501057), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020539028.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||*=|||||||||||| targets:4675   CAAAUAAAAAAGAACGGAUGGAGU   4698 Target Full Sequence	2.5	PREDICTED: Zea mays DNA dependent RNA polymerase D largest subunit (LOC100501057), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020539025.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||*=|||||||||||| targets:4765   CAAAUAAAAAAGAACGGAUGGAGU   4788 Target Full Sequence	2.5	PREDICTED: Zea mays DNA dependent RNA polymerase D largest subunit (LOC100501057), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020539030.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||*=|||||||||||| targets:5710   CAAAUAAAAAAGAACGGAUGGAGU   5733 Target Full Sequence	2.5	PREDICTED: Zea mays DNA dependent RNA polymerase D largest subunit (LOC100501057), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020544837.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   ||||||||||*=|||||||||||| targets:3728   CAAAUAAAAAAGAACGGAUGGAGU   3751 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103630305 (LOC103630305), mRNA	NA	coding protein	psRNATarget
JB166291.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |*||||||||||||||||*||||| targets:59   CUAAUAAAAAGAAACGGAGGGAGU   82 Target Full Sequence	1.5	Sequence 3955 from Patent EP2559767	NA	coding protein	psRNATarget
LQ237960.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |*||||||||||||||||*||||| targets:59   CUAAUAAAAAGAAACGGAGGGAGU   82 Target Full Sequence	1.5	Sequence 3955 from Patent EP2985353	NA	coding protein	psRNATarget
HI405830.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |*||||||||||||||||*||||| targets:59   CUAAUAAAAAGAAACGGAGGGAGU   82 Target Full Sequence	1.5	Sequence 3955 from Patent EP2074227	NA	coding protein	psRNATarget
LQ240840.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||||||||*||||||||*||||| targets:63   CAAAUAAAACGAAACGGAGGGAGU   86 Target Full Sequence	2.5	Sequence 6835 from Patent EP2985353	NA	coding protein	psRNATarget
LQ242326.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||||||||*||||||||*||||| targets:63   CAAAUAAAACGAAACGGAGGGAGU   86 Target Full Sequence	2.5	Sequence 8321 from Patent EP2985353	NA	coding protein	psRNATarget
LQ241458.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||||||||*||||||||*||||| targets:63   CAAAUAAAACGAAACGGAGGGAGU   86 Target Full Sequence	2.5	Sequence 7453 from Patent EP2985353	NA	coding protein	psRNATarget
JB169171.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||||||||*||||||||*||||| targets:63   CAAAUAAAACGAAACGGAGGGAGU   86 Target Full Sequence	2.5	Sequence 6835 from Patent EP2559767	NA	coding protein	psRNATarget
HI409328.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||||||||*||||||||*||||| targets:63   CAAAUAAAACGAAACGGAGGGAGU   86 Target Full Sequence	2.5	Sequence 7453 from Patent EP2074227	NA	coding protein	psRNATarget
HI410196.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||||||||*||||||||*||||| targets:63   CAAAUAAAACGAAACGGAGGGAGU   86 Target Full Sequence	2.5	Sequence 8321 from Patent EP2074227	NA	coding protein	psRNATarget
JB169789.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||||||||*||||||||*||||| targets:63   CAAAUAAAACGAAACGGAGGGAGU   86 Target Full Sequence	2.5	Sequence 7453 from Patent EP2559767	NA	coding protein	psRNATarget
JB170657.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||||||||*||||||||*||||| targets:63   CAAAUAAAACGAAACGGAGGGAGU   86 Target Full Sequence	2.5	Sequence 8321 from Patent EP2559767	NA	coding protein	psRNATarget
HI408710.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||||||||*||||||||*||||| targets:63   CAAAUAAAACGAAACGGAGGGAGU   86 Target Full Sequence	2.5	Sequence 6835 from Patent EP2074227	NA	coding protein	psRNATarget
JB167691.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||*||||||||||||||*||||| targets:65   CAACUAAAAAGAAACGGAGGGAGU   88 Target Full Sequence	1.5	Sequence 5355 from Patent EP2559767	NA	coding protein	psRNATarget
HI407230.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||*||||||||||||||*||||| targets:65   CAACUAAAAAGAAACGGAGGGAGU   88 Target Full Sequence	1.5	Sequence 5355 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239360.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||*||||||||||||||*||||| targets:65   CAACUAAAAAGAAACGGAGGGAGU   88 Target Full Sequence	1.5	Sequence 5355 from Patent EP2985353	NA	coding protein	psRNATarget
LQ237988.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||*|||||*|||||||||||||| targets:67   CAACUAAAACGAAACGGAUGGAGU   90 Target Full Sequence	1.0	Sequence 3983 from Patent EP2985353	NA	coding protein	psRNATarget
JB166319.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||*|||||*|||||||||||||| targets:67   CAACUAAAACGAAACGGAUGGAGU   90 Target Full Sequence	1.0	Sequence 3983 from Patent EP2559767	NA	coding protein	psRNATarget
HI405858.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||*|||||*|||||||||||||| targets:67   CAACUAAAACGAAACGGAUGGAGU   90 Target Full Sequence	1.0	Sequence 3983 from Patent EP2074227	NA	coding protein	psRNATarget
HI408623.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |*||||||||||||||||*||||| targets:68   CUAAUAAAAAGAAACGGAGGGAGU   91 Target Full Sequence	1.5	Sequence 6748 from Patent EP2074227	NA	coding protein	psRNATarget
JB169084.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |*||||||||||||||||*||||| targets:68   CUAAUAAAAAGAAACGGAGGGAGU   91 Target Full Sequence	1.5	Sequence 6748 from Patent EP2559767	NA	coding protein	psRNATarget
LQ240753.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |*||||||||||||||||*||||| targets:68   CUAAUAAAAAGAAACGGAGGGAGU   91 Target Full Sequence	1.5	Sequence 6748 from Patent EP2985353	NA	coding protein	psRNATarget
XM_008664463.2	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |*||||||||||||||||*||||| targets:152   CUAAUAAAAAGAAACGGAGGGAGU   175 Target Full Sequence	1.5	PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X3, mRNA	NA	coding protein	psRNATarget
EU973473.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |*||||||||||||||||*||||| targets:708   CUAAUAAAAAGAAACGGAGGGAGU   731 Target Full Sequence	1.5	Zea mays clone 399411 mRNA sequence	NA	coding protein	psRNATarget
BT062468.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||*||||||||||||||*||||| targets:630   CAACUAAAAAGAAACGGAGGGAGU   653 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0302A02 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001143050.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |*||||||||||||||||*||||| targets:1143   CUAAUAAAAAGAAACGGAGGGAGU   1166 Target Full Sequence	1.5	Zea mays uncharacterized LOC100216637 (LOC100216637), mRNA	NA	coding protein	psRNATarget
BT037092.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |*||||||||||||||||*||||| targets:1143   CUAAUAAAAAGAAACGGAGGGAGU   1166 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0154F16 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008656230.2	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||*||||||||||||||*||||| targets:46   CAACUAAAAAGAAACGGAGGGAGU   69 Target Full Sequence	1.5	PREDICTED: Zea mays phosphatidylinositol transfer protein 2 (LOC103634487), mRNA	NA	coding protein	psRNATarget
EU971616.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||*||||||||||||||*||||| targets:1221   CAACUAAAAAGAAACGGAGGGAGU   1244 Target Full Sequence	1.5	Zea mays clone 368130 rieske domain containing protein mRNA, complete cds	NA	coding protein	psRNATarget
EU970288.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |*||||||||||||||||*||||| targets:1382   CUAAUAAAAAGAAACGGAGGGAGU   1405 Target Full Sequence	1.5	Zea mays clone 343094 metal tolerance protein C3 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001156357.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||*||||||||||||||*||||| targets:1574   CAACUAAAAAGAAACGGAGGGAGU   1597 Target Full Sequence	1.5	Zea mays Acetylornithine deacetylase (pco121857a), mRNA	NA	coding protein	psRNATarget
EU964807.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||*||||||||||||||*||||| targets:1574   CAACUAAAAAGAAACGGAGGGAGU   1597 Target Full Sequence	1.5	Zea mays clone 281665 acetylornithine deacetylase mRNA, complete cds	NA	coding protein	psRNATarget
XM_008674191.2	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||*||||||||||||||*||||| targets:1210   CAACUAAAAAGAAACGGAGGGAGU   1233 Target Full Sequence	1.5	PREDICTED: Zea mays putative protein S-acyltransferase 16 (LOC100273154), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008669400.2	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |*||||||||||||||||*||||| targets:1659   CUAAUAAAAAGAAACGGAGGGAGU   1682 Target Full Sequence	1.5	PREDICTED: Zea mays Pentatricopeptide repeat-containing protein PNM1 mitochondrial (LOC100274849), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008675770.2	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |*||||||||||||||||*||||| targets:1867   CUAAUAAAAAGAAACGGAGGGAGU   1890 Target Full Sequence	1.5	PREDICTED: Zea mays pectinesterase-like (LOC103650113), mRNA	NA	coding protein	psRNATarget
XM_020542418.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |*||||||||||||||||*||||| targets:2034   CUAAUAAAAAGAAACGGAGGGAGU   2057 Target Full Sequence	1.5	PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008658752.2	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |*||||||||||||||||*||||| targets:2101   CUAAUAAAAAGAAACGGAGGGAGU   2124 Target Full Sequence	1.5	PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001305845.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||*|||||*|||||||||||||| targets:2279   CAACUAAAACGAAACGGAUGGAGU   2302 Target Full Sequence	1.0	Zea mays uncharacterized LOC542022 (LOC542022), mRNA	NA	coding protein	psRNATarget
XM_020551485.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||*||||||||||||||*||||| targets:2587   CAACUAAAAAGAAACGGAGGGAGU   2610 Target Full Sequence	1.5	PREDICTED: Zea mays putative cytochrome P450 superfamily protein (LOC100279319), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008664460.2	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |*||||||||||||||||*||||| targets:172   CUAAUAAAAAGAAACGGAGGGAGU   195 Target Full Sequence	1.5	PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020544903.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |*||||||||||||||||*||||| targets:3200   CUAAUAAAAAGAAACGGAGGGAGU   3223 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020544902.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |*||||||||||||||||*||||| targets:3209   CUAAUAAAAAGAAACGGAGGGAGU   3232 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020541158.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||*|||||*|||||||||||||* targets:1086   CAACUAAAACGAAACGGAUGGAGC   1109 Target Full Sequence	2.0	PREDICTED: Zea mays acid phosphatase 1 (LOC103633566), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020541157.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||*|||||*|||||||||||||* targets:1088   CAACUAAAACGAAACGGAUGGAGC   1111 Target Full Sequence	2.0	PREDICTED: Zea mays acid phosphatase 1 (LOC103633566), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008655254.2	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||*|||||*|||||||||||||* targets:1107   CAACUAAAACGAAACGGAUGGAGC   1130 Target Full Sequence	2.0	PREDICTED: Zea mays acid phosphatase 1 (LOC103633566), transcript variant X1, mRNA	NA	coding protein	psRNATarget
JB166289.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |*||||||||*|||||||*||||| targets:59   CUAAUAAAAAAAAACGGAGGGAGU   82 Target Full Sequence	2.5	Sequence 3953 from Patent EP2559767	NA	coding protein	psRNATarget
HI405828.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |*||||||||*|||||||*||||| targets:59   CUAAUAAAAAAAAACGGAGGGAGU   82 Target Full Sequence	2.5	Sequence 3953 from Patent EP2074227	NA	coding protein	psRNATarget
LQ237958.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |*||||||||*|||||||*||||| targets:59   CUAAUAAAAAAAAACGGAGGGAGU   82 Target Full Sequence	2.5	Sequence 3953 from Patent EP2985353	NA	coding protein	psRNATarget
JB169555.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||*|||||*||||||||*||||| targets:60   CAAUUAAAACGAAACGGAGGGAGU   83 Target Full Sequence	2.5	Sequence 7219 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241224.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||*|||||*||||||||*||||| targets:60   CAAUUAAAACGAAACGGAGGGAGU   83 Target Full Sequence	2.5	Sequence 7219 from Patent EP2985353	NA	coding protein	psRNATarget
HI409094.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||*|||||*||||||||*||||| targets:60   CAAUUAAAACGAAACGGAGGGAGU   83 Target Full Sequence	2.5	Sequence 7219 from Patent EP2074227	NA	coding protein	psRNATarget
HI405860.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |*||||||||*|||||||*||||| targets:64   CUAAUAAAAAAAAACGGAGGGAGU   87 Target Full Sequence	2.5	Sequence 3985 from Patent EP2074227	NA	coding protein	psRNATarget
LQ237990.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |*||||||||*|||||||*||||| targets:64   CUAAUAAAAAAAAACGGAGGGAGU   87 Target Full Sequence	2.5	Sequence 3985 from Patent EP2985353	NA	coding protein	psRNATarget
JB166321.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |*||||||||*|||||||*||||| targets:64   CUAAUAAAAAAAAACGGAGGGAGU   87 Target Full Sequence	2.5	Sequence 3985 from Patent EP2559767	NA	coding protein	psRNATarget
HI403287.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||*|||||*||||||||*||||| targets:70   CAACUAAAAUGAAACGGAGGGAGU   93 Target Full Sequence	2.5	Sequence 1412 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235417.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||*|||||*||||||||*||||| targets:70   CAACUAAAAUGAAACGGAGGGAGU   93 Target Full Sequence	2.5	Sequence 1412 from Patent EP2985353	NA	coding protein	psRNATarget
JB163748.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||*|||||*||||||||*||||| targets:70   CAACUAAAAUGAAACGGAGGGAGU   93 Target Full Sequence	2.5	Sequence 1412 from Patent EP2559767	NA	coding protein	psRNATarget
HI407319.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||*|||||*||||||||*||||| targets:230   CAACUAAAACGAAACGGAGGGAGU   253 Target Full Sequence	2.5	Sequence 5444 from Patent EP2074227	NA	coding protein	psRNATarget
JB167780.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||*|||||*||||||||*||||| targets:230   CAACUAAAACGAAACGGAGGGAGU   253 Target Full Sequence	2.5	Sequence 5444 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239449.1	ncRNA:24   GUUUAUUUUUCUUUGCCUACCUCA   1   |||*|||||*||||||||*||||| targets:230   CAACUAAAACGAAACGGAGGGAGU   253 Target Full Sequence	2.5	Sequence 5444 from Patent EP2985353	NA	coding protein	psRNATarget