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BaseInfo

ncRNA ID novel_zma_miR5735
Species Zea mays
Class miRNA
Genome position Chr10:123206198-123206281 [+]
Reference genome RefGen_v4
Source SRR1618883
Length 24
Mature sequence(if miRNA) 61 - CCCUCAAUCCCAUGCAUCCAAACC - 84
Stem-loop(if miRNA) --          C U      G      ----U ---G   C  CAU
  UUUGGAUGUA G GGAUUG AGGGGA     C    AAG GG   A
  |||||||||| | |||||| ||||||     |    ||| ||
  AAACCUACGU C CCUAAC UCCCCU     G    UUC CC   U
CC          A -      -      UACCU AUCA   -  UAA
Stem-loop sequence UUUGGAUGUACGUGGAUUGGAGGGGAUCGAAGCGGCAUAUAAUCCCUUACUAGUCCAUUCCCCUCAAUCCCAUGCAUCCAAACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ091126.1
ncRNA:24   CCAAACCUACGUACCCUAACUCCC   1
  ||||||||||||||||||||||||
targets:83   GGUUUGGAUGCAUGGGAUUGAGGG   106

0.0 TSA: Zea mays contig26773, mRNA sequence NA coding protein psRNATarget