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BaseInfo

ncRNA ID	novel_zma_miR5731
Species	Zea mays
Class	miRNA
Genome position	Chr4:26317470-26317607 [-]
Reference genome	RefGen_v4
Source	SRR2647221
Length	25
Mature sequence(if miRNA)	1 - AGGUGUAUCUUCUUUUUCGGAAGUC - 25
Stem-loop(if miRNA)	--                          A                                    CUAG   UUUCCGAAAAAGAAGAUGCACCUUGU GGUAUGAGUACUCUAUUAAUUCUAUUAAGCCUUGGG    G   |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   GAAGGCUUUUUCUUCUAUGUGGAACA CCAUACUCAUGAGAUAAUUAAGAUAAUUCGGAACCC    A CU                          A                                    CUAU
Stem-loop sequence	UUUCCGAAAAAGAAGAUGCACCUUGUAGGUAUGAGUACUCUAUUAAUUCUAUUAAGCCUUGGGCUAGGAUAUCCCCAAGGCUUAAUAGAAUUAAUAGAGUACUCAUACCAACAAGGUGUAUCUUCUUUUUCGGAAGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT038952.1	ncRNA:25   CUGA----A---GGCUUUUUCUUCUAUGUGGA   1   *|||----|---=||||||||=|||||||||* targets:1444   CACUGAGAUAAGUCGAAAAAGGAGAUACACCG   1475 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0345D11 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001147032.1	ncRNA:25   CUGA----A---GGCUUUUUCUUCUAUGUGGA   1   *|||----|---=||||||||=|||||||||* targets:1444   CACUGAGAUAAGUCGAAAAAGGAGAUACACCG   1475 Target Full Sequence	2.5	Zea mays putative B3 DNA binding domain family protein (LOC100272565), mRNA	NA	coding protein	psRNATarget