ncRNA ID | novel_zma_miR5731 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:26317470-26317607 [-] |
Reference genome | RefGen_v4 |
Source | SRR2647221 |
Length | 25 |
Mature sequence(if miRNA) | 1 - AGGUGUAUCUUCUUUUUCGGAAGUC - 25 |
Stem-loop(if miRNA) |
--                          A                                    CUAG   UUUCCGAAAAAGAAGAUGCACCUUGU GGUAUGAGUACUCUAUUAAUUCUAUUAAGCCUUGGG    G   |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   GAAGGCUUUUUCUUCUAUGUGGAACA CCAUACUCAUGAGAUAAUUAAGAUAAUUCGGAACCC    A CU                          A                                    CUAU |
Stem-loop sequence | UUUCCGAAAAAGAAGAUGCACCUUGUAGGUAUGAGUACUCUAUUAAUUCUAUUAAGCCUUGGGCUAGGAUAUCCCCAAGGCUUAAUAGAAUUAAUAGAGUACUCAUACCAACAAGGUGUAUCUUCUUUUUCGGAAGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT038952.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0345D11 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001147032.1 |
|
2.5 | Zea mays putative B3 DNA binding domain family protein (LOC100272565), mRNA | NA | coding protein | psRNATarget |