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BaseInfo

ncRNA ID	osa-miRf10170-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - AGUCCCGGUUGAUAACACCAACCGG - NA
Stem-loop(if miRNA)	C              --------AA    C UUAGUCCCGGUUCUA AUCUUUAGUCUCGGUUGGUGUUA CAACCGGGACUAAA          UGAU U               A ||||||||||||||||||||||| ||||||||||||||          |||| |               A UAGAAAUCAGGGCCAACCACAAU GUUGGCCCUGAUUU          CCGG A               U                        A              CUAUAGCCCC    - CUGUUCCGGACUGUC
Stem-loop sequence	AUCUUUAGUCUCGGUUGGUGUUACCAACCGGGACUAAAAAUGAUCUUUAGUCCCGGUUCUAAAUCUGUCAGGCCUUGUCAGGCCCCCCGAUAUCUUUAGUCCCGGUUGAUAACACCAACCGGGACUAAAGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ236416.1	ncRNA:25   GGCCAACCACAAUAGUUGGCCCUGA   1   ||||||*||||||||||||*||||| targets:53   CCGGUUAGUGUUAUCAACCAGGACU   77 Target Full Sequence	2.5	Sequence 2411 from Patent EP2985353	NA	coding protein	psRNATarget
JB164747.1	ncRNA:25   GGCCAACCACAAUAGUUGGCCCUGA   1   ||||||*||||||||||||*||||| targets:53   CCGGUUAGUGUUAUCAACCAGGACU   77 Target Full Sequence	2.5	Sequence 2411 from Patent EP2559767	NA	coding protein	psRNATarget
HI404286.1	ncRNA:25   GGCCAACCACAAUAGUUGGCCCUGA   1   ||||||*||||||||||||*||||| targets:53   CCGGUUAGUGUUAUCAACCAGGACU   77 Target Full Sequence	2.5	Sequence 2411 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236648.1	ncRNA:25   GGCCAACCACAAUAGUUGGCCCUGA   1   ||||||||||*||*||||||||||| targets:54   CCGGUUGGUGCUACCAACCGGGACU   78 Target Full Sequence	2.5	Sequence 2643 from Patent EP2985353	NA	coding protein	psRNATarget
JB164979.1	ncRNA:25   GGCCAACCACAAUAGUUGGCCCUGA   1   ||||||||||*||*||||||||||| targets:54   CCGGUUGGUGCUACCAACCGGGACU   78 Target Full Sequence	2.5	Sequence 2643 from Patent EP2559767	NA	coding protein	psRNATarget
HI404518.1	ncRNA:25   GGCCAACCACAAUAGUUGGCCCUGA   1   ||||||||||*||*||||||||||| targets:54   CCGGUUGGUGCUACCAACCGGGACU   78 Target Full Sequence	2.5	Sequence 2643 from Patent EP2074227	NA	coding protein	psRNATarget
XM_015758314.1	ncRNA:25   GGCCAACCACAAUAGUUGGCCCUGA   1   ||||||*||||||*||||||||||| targets:917   CCGGUUUGUGUUACCAACCGGGACU   941 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278346 (LOC107278346), transcript variant X1, mRNA	uncharacterized LOC107278346(LOC107278346)	coding protein	psRNATarget
AK289098.1	ncRNA:25   GGCCAACCACAAUAGUUGGCCCUGA   1   |||||||||*|||*||||||||||| targets:115   CCGGUUGGUUUUACCAACCGGGACU   139 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK288424.1	ncRNA:25   GGCCAACCACAAUAGUUGGCCCUGA   1   ||||||*||||||*||||||||||| targets:2392   CCGGUUAGUGUUACCAACCGGGACU   2416 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK288405.1	ncRNA:25   GGCCAACCACAAUAGUUGGCCCUGA   1   ||*||||||||||*||||||||||| targets:2399   CCCGUUGGUGUUACCAACCGGGACU   2423 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090030E11, full insert sequence	NA	coding protein	psRNATarget
AK288544.1	ncRNA:25   GGCCAACCACAAUAGUUGGCCCUGA   1   |||||||*|*|*||||||||||||| targets:1868   CCGGUUGUUCUCAUCAACCGGGACU   1892 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J090046G24, full insert sequence	NA	coding protein	psRNATarget
XM_015755256.1	ncRNA:25   GGCCAACCACAAUAGUUGGCCCUGA   1   ||****|||||||*||||||||||| targets:62   CCAUCCGGUGUUACCAACCGGGACU   86 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346665 (LOC4346665), transcript variant X2, mRNA	uncharacterized LOC4346665(LOC4346665)	coding protein	psRNATarget