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BaseInfo

ncRNA ID novel_zma_miR5727
Species Zea mays
Class miRNA
Genome position Chr4:57592610-57592786 [-]
Reference genome RefGen_v4
Source SRR2647221;SRR2647385;SRR2647387;SRR2647389;SRR2647390;SRR2647467
Length 24
Mature sequence(if miRNA) 154 - GUUCCACUGGCGGUUGGCUAAGGG - 177
Stem-loop(if miRNA) --GUUC             -C    -  C  AA           -AACA       U  A   CAC    AA      C    CU   UA
      CACUGGCGGUUGG  UAAG GG AC  CCAGUGGAAAU     UUCCACU GC GUU   UUAA  GAACCG CAGU  AAA  G
      |||||||||||||  |||| || ||  |||||||||||     ||||||| || |||   ||||  |||||| ||||  |||  C
      GUGACCGCCAACC  AUUC CU UG  GGUCGCCUUUA     AAGGUGA CG CAA   AAUU  CUUGGU GUCA  UUU  U
AUAAAU             AA    A  -  GC           CAAUA       C  G   CAA    GA      A    CC   UC
Stem-loop sequence GUUCCACUGGCGGUUGGCUAAGGGCACAACCAGUGGAAAUAACAUUCCACUUGCAGUUCACUUAAAAGAACCGCCAGUCUAAAUAGCUCUUUUCCACUGAUGGUUCAGUUAAAACAACGGCCAGUGGAAAUAACAUUUCCGCUGGCGGUUCACUUAAACCAACCGCCAGUGUAAAUA