ncRNA ID | novel_zma_miR5727 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:57592610-57592786 [-] |
Reference genome | RefGen_v4 |
Source | SRR2647221;SRR2647385;SRR2647387;SRR2647389;SRR2647390;SRR2647467 |
Length | 24 |
Mature sequence(if miRNA) | 154 - GUUCCACUGGCGGUUGGCUAAGGG - 177 |
Stem-loop(if miRNA) |
--GUUC             -C    -  C  AA           -AACA       U  A   CAC    AA      C    CU   UA       CACUGGCGGUUGG  UAAG GG AC  CCAGUGGAAAU     UUCCACU GC GUU   UUAA  GAACCG CAGU  AAA  G       |||||||||||||  |||| || ||  |||||||||||     ||||||| || |||   ||||  |||||| ||||  |||  C       GUGACCGCCAACC  AUUC CU UG  GGUCGCCUUUA     AAGGUGA CG CAA   AAUU  CUUGGU GUCA  UUU  U AUAAAU             AA    A  -  GC           CAAUA       C  G   CAA    GA      A    CC   UC |
Stem-loop sequence | GUUCCACUGGCGGUUGGCUAAGGGCACAACCAGUGGAAAUAACAUUCCACUUGCAGUUCACUUAAAAGAACCGCCAGUCUAAAUAGCUCUUUUCCACUGAUGGUUCAGUUAAAACAACGGCCAGUGGAAAUAACAUUUCCGCUGGCGGUUCACUUAAACCAACCGCCAGUGUAAAUA |