ncRNA ID | novel_zma_miR5726 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:70243398-70243582 [-] |
Reference genome | RefGen_v4 |
Source | SRR2647221;SRR2647343;SRR2647467 |
Length | 24 |
Mature sequence(if miRNA) | 162 - AAAAAGCUAGCCUGAUAGGGGGUU - 185 |
Stem-loop(if miRNA) |
--             G       G   A          A               UC                                    U   AAAAAGCUAGCCU AUAGGGG UUG ACCCUCAACC UAUAAAUCAUGCUUU  CACUCUCACCAGACAAUGUGGGACUAUUCCCAACAA G   ||||||||||||| ||||||| ||| |||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||   UUUUUCGAUCGGA UAUCCCC AAC UGGGAGUUGG AUAUUUGGUACGAAA  GUGAGAGUGGUUUGUUACACCCUGAUAAGGGUUGUU A GG             G       -   G          A               GU                                    A |
Stem-loop sequence | AAAAAGCUAGCCUGAUAGGGGGUUGAACCCUCAACCAUAUAAAUCAUGCUUUUCCACUCUCACCAGACAAUGUGGGACUAUUCCCAACAAUGAAUUGUUGGGAAUAGUCCCACAUUGUUUGGUGAGAGUGUGAAAGCAUGGUUUAUAAGGUUGAGGGUGCAACCCCUAUGAGGCUAGCUUUUUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008664926.2 |
|
0.0 | PREDICTED: Zea mays cysteine-rich receptor-like protein kinase 6 (LOC103641588), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008664926.2 |
|
1.5 | PREDICTED: Zea mays cysteine-rich receptor-like protein kinase 6 (LOC103641588), mRNA | NA | coding protein | psRNATarget |