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BaseInfo

ncRNA ID novel_zma_miR5725
Species Zea mays
Class miRNA
Genome position Chr4:143177956-143178050 [-]
Reference genome RefGen_v4
Source SRR2647221
Length 21
Mature sequence(if miRNA) 75 - GUGAAGCUUCACCCUAGGUGA - 95
Stem-loop(if miRNA) --  G   -    A      G  ACAAAU   GU    ---CU      A
  GU AAG CUUC CCCUAG UG      GGC  GGGC     AUAUAU U
  || ||| |||| |||||| ||      |||  ||||     |||||| A
  CG UUC GAAG GGGGUU AU      UUG  UCCG     UAUAUG C
CC  G   C    -      G  -AACAU   GU    AACAU      U
Stem-loop sequence GUGAAGCUUCACCCUAGGUGACAAAUGGCGUGGGCCUAUAUAUAUACUGUAUAUUACAAGCCUUGGUUUACAAUAGUUGGGGGAAGCCUUGGCCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU945620.1
ncRNA:21   AGUGGAUCCCACUUCGAAGUG   1
  |||||**||||||||||||||
targets:257   UCACCCUGGGUGAAGCUUCAC   277

2.0 Zea mays clone 279770 mRNA sequence NA coding protein psRNATarget