ncRNA ID | novel_zma_miR5723 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:186579300-186579484 [-] |
Reference genome | RefGen_v4 |
Source | SRR1618883 |
Length | 24 |
Mature sequence(if miRNA) | 162 - CUCAGCUUGGCACACCGGACUGUC - 185 |
Stem-loop(if miRNA) |
--- U   CU    A        U        GUG         GU             ---   U      U     CUC  UGCUCUCGGGACUC    C CAG  UGGC CACCGGAC GUCCGGUG   CACCGGACA  GUCCGGUGCACUA   GAC GGUCCG GUGAA   GC              G    | |||  |||| |||||||| ||||||||   |||||||||  |||||||||||||   ||| |||||| |||||   ||    G GUC  ACUG GUGGCCUG CAGGCCAC   GUGGCCUGU  CAGGCCACGUGGU   CUG CCAGGC CACUU   AU              A GCG C   -U    A        U        GUG         --             GGC   -      -     AAA  CGGCAUACGGCGGC |
Stem-loop sequence | CUCAGCUUGGCACACCGGACUGUCCGGUGGUGCACCGGACAGUGUCCGGUGCACUAGACUGGUCCGUGUGAACUCGCUGCUCUCGGGACUCGACGGCGGCAUACGGCUAAAAUUCACCGGACCGUCCGGUGGUGCACCGGACUGUCCGGUGGUGCACCGGACUGUCCGGUGAGUCAUCUGCGGCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT066461.2 |
|
1.5 | Zea mays full-length cDNA clone ZM_BFb0008E18 mRNA, complete cds | NA | coding protein | psRNATarget |