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BaseInfo

ncRNA ID novel_zma_miR5722
Species Zea mays
Class miRNA
Genome position Chr10:86415708-86415830 [+]
Reference genome RefGen_v4
Source SRR2647221
Length 23
Mature sequence(if miRNA) 1 - CCGUCACUAGAAAUCGUAUUUCU - 23
Stem-loop(if miRNA) --                        G                         C  C     
  CCGUCACUAGAAAUCGUAUUUCUA UGGCGGUUCCUUAAGAAAACCGCCA UA AAAUCA
  |||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||U
  GGCGGUGAUCUUUAGCAUAAAGAU ACCGCCAAGGAAUUCUUUUGGCGGU AU UUUAGG
UU                        G                         C  C     
Stem-loop sequence CCGUCACUAGAAAUCGUAUUUCUAGUGGCGGUUCCUUAAGAAAACCGCCACUACAAAUCAUGGAUUUCUACUGGCGGUUUUCUUAAGGAACCGCCAGUAGAAAUACGAUUUCUAGUGGCGGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI403085.1
ncRNA:23   UCUUUAUGCUAAAGAUCACUGCC   1
  |||||||=|||||||||||*|||
targets:73   AGAAAUAUGAUUUCUAGUGUCGG   95

2.5 Sequence 1210 from Patent EP2074227 NA coding protein psRNATarget
LQ235215.1
ncRNA:23   UCUUUAUGCUAAAGAUCACUGCC   1
  |||||||=|||||||||||*|||
targets:73   AGAAAUAUGAUUUCUAGUGUCGG   95

2.5 Sequence 1210 from Patent EP2985353 NA coding protein psRNATarget
JB163546.1
ncRNA:23   UCUUUAUGCUAAAGAUCACUGCC   1
  |||||||=|||||||||||*|||
targets:73   AGAAAUAUGAUUUCUAGUGUCGG   95

2.5 Sequence 1210 from Patent EP2559767 NA coding protein psRNATarget