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BaseInfo

ncRNA ID novel_zma_miR5720
Species Zea mays
Class miRNA
Genome position Chr4:173809215-173809300 [-]
Reference genome RefGen_v4
Source SRR2647221;SRR2647388;SRR2647390
Length 24
Mature sequence(if miRNA) 1 - AUCCAAUCUCACUUAAUCCAUAUG - 24
Stem-loop(if miRNA) --C        GA          AAAAAAUAAGAAA   UUUGACUUG
   AUGGAUUG  UGAGAUUGGA             AAG         U
   ||||||||  ||||||||||             |||
   UACCUAAU  ACUCUAACCU             CAA         U
GUA        UC          ----------ACU   ACUUAGAGU
Stem-loop sequence CAUGGAUUGGAUGAGAUUGGAAAAAAAUAAGAAAAAGUUUGACUUGUUUGAGAUUCAAACUCAUCCAAUCUCACUUAAUCCAUAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001196996.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  ||||||||||=|||||||||||||
targets:301   CAUAUGGAUUGAGUGAGAUUGGAU   324

1.0 Zea mays uncharacterized LOC100502518 (LOC100502518), mRNA NA coding protein psRNATarget
BT088422.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  ||||||||||=|||||||||||||
targets:301   CAUAUGGAUUGAGUGAGAUUGGAU   324

1.0 Zea mays full-length cDNA clone ZM_BFc0189N22 mRNA, complete cds NA coding protein psRNATarget
HI405896.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  ||||||||||=|||||||||||||
targets:16   CAUAUGGAUUGAGUGAGAUUGGAU   39

1.0 Sequence 4021 from Patent EP2074227 NA coding protein psRNATarget
JB166357.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  ||||||||||=|||||||||||||
targets:16   CAUAUGGAUUGAGUGAGAUUGGAU   39

1.0 Sequence 4021 from Patent EP2559767 NA coding protein psRNATarget
LQ238026.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  ||||||||||=|||||||||||||
targets:16   CAUAUGGAUUGAGUGAGAUUGGAU   39

1.0 Sequence 4021 from Patent EP2985353 NA coding protein psRNATarget
EU962683.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=|||||||||||||
targets:1548   CAUGUGGAUUGAGUGAGAUUGGAU   1571

1.0 Zea mays clone 244714 mRNA sequence NA coding protein psRNATarget
AY109413.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=|||||||||||||
targets:1583   CAUGUGGAUUGAGUGAGAUUGGAU   1606

1.0 Zea mays CL2362_1 mRNA sequence NA coding protein psRNATarget
BT040208.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  ||||||||||=|||||||||||=|
targets:1302   CAUAUGGAUUGAGUGAGAUUGGGU   1325

2.5 Zea mays full-length cDNA clone ZM_BFc0071O17 mRNA, complete cds NA coding protein psRNATarget
NM_001149687.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=|||||||||||||
targets:671   CAUGUGGAUUGAGUGAGAUUGGAU   694

1.0 Zea mays uncharacterized LOC100275644 (LOC100275644), mRNA NA coding protein psRNATarget
EU957313.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=|||||||||||||
targets:671   CAUGUGGAUUGAGUGAGAUUGGAU   694

1.0 Zea mays clone 1588341 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
EU942632.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=|||||||||||||
targets:193   CAUGUGGAUUGAGUGAGAUUGGAU   216

1.0 Zea mays clone 1525411 mRNA sequence NA coding protein psRNATarget
HI405886.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=|||||||||||||
targets:30   CAUGUGGAUUGAGUGAGAUUGGAU   53

1.0 Sequence 4011 from Patent EP2074227 NA coding protein psRNATarget
LQ238016.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=|||||||||||||
targets:30   CAUGUGGAUUGAGUGAGAUUGGAU   53

1.0 Sequence 4011 from Patent EP2985353 NA coding protein psRNATarget
JB166347.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=|||||||||||||
targets:30   CAUGUGGAUUGAGUGAGAUUGGAU   53

1.0 Sequence 4011 from Patent EP2559767 NA coding protein psRNATarget
JB166301.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=|||||||||||||
targets:27   CAUGUGGAUUGAGUGAGAUUGGAU   50

1.0 Sequence 3965 from Patent EP2559767 NA coding protein psRNATarget
HI405840.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=|||||||||||||
targets:27   CAUGUGGAUUGAGUGAGAUUGGAU   50

1.0 Sequence 3965 from Patent EP2074227 NA coding protein psRNATarget
LQ237970.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=|||||||||||||
targets:27   CAUGUGGAUUGAGUGAGAUUGGAU   50

1.0 Sequence 3965 from Patent EP2985353 NA coding protein psRNATarget
HI405880.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=|||||||||||||
targets:27   CAUGUGGAUUGAGUGAGAUUGGAU   50

1.0 Sequence 4005 from Patent EP2074227 NA coding protein psRNATarget
LQ238010.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=|||||||||||||
targets:27   CAUGUGGAUUGAGUGAGAUUGGAU   50

1.0 Sequence 4005 from Patent EP2985353 NA coding protein psRNATarget
JB166341.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=|||||||||||||
targets:27   CAUGUGGAUUGAGUGAGAUUGGAU   50

1.0 Sequence 4005 from Patent EP2559767 NA coding protein psRNATarget
LQ238017.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=|||||||||||||
targets:29   CAUGUGGAUUGAGUGAGAUUGGAU   52

1.0 Sequence 4012 from Patent EP2985353 NA coding protein psRNATarget
HI405887.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=|||||||||||||
targets:29   CAUGUGGAUUGAGUGAGAUUGGAU   52

1.0 Sequence 4012 from Patent EP2074227 NA coding protein psRNATarget
JB166348.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=|||||||||||||
targets:29   CAUGUGGAUUGAGUGAGAUUGGAU   52

1.0 Sequence 4012 from Patent EP2559767 NA coding protein psRNATarget
LQ242020.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=|||||||||||||
targets:8   CAUGUGGAUUGAGUGAGAUUGGAU   31

1.0 Sequence 8015 from Patent EP2985353 NA coding protein psRNATarget
HI409890.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=|||||||||||||
targets:8   CAUGUGGAUUGAGUGAGAUUGGAU   31

1.0 Sequence 8015 from Patent EP2074227 NA coding protein psRNATarget
JB170351.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=|||||||||||||
targets:8   CAUGUGGAUUGAGUGAGAUUGGAU   31

1.0 Sequence 8015 from Patent EP2559767 NA coding protein psRNATarget
LQ238086.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  ||||||||||=||||=||||||||
targets:8   CAUAUGGAUUGAGUGGGAUUGGAU   31

2.5 Sequence 4081 from Patent EP2985353 NA coding protein psRNATarget
HI405956.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  ||||||||||=||||=||||||||
targets:8   CAUAUGGAUUGAGUGGGAUUGGAU   31

2.5 Sequence 4081 from Patent EP2074227 NA coding protein psRNATarget
JB166417.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  ||||||||||=||||=||||||||
targets:8   CAUAUGGAUUGAGUGGGAUUGGAU   31

2.5 Sequence 4081 from Patent EP2559767 NA coding protein psRNATarget
JB170621.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  ||||||||||=|||||||||||=|
targets:11   CAUAUGGAUUGAGUGAGAUUGGGU   34

2.5 Sequence 8285 from Patent EP2559767 NA coding protein psRNATarget
LQ242290.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  ||||||||||=|||||||||||=|
targets:11   CAUAUGGAUUGAGUGAGAUUGGGU   34

2.5 Sequence 8285 from Patent EP2985353 NA coding protein psRNATarget
HI410160.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  ||||||||||=|||||||||||=|
targets:11   CAUAUGGAUUGAGUGAGAUUGGGU   34

2.5 Sequence 8285 from Patent EP2074227 NA coding protein psRNATarget
XM_008676887.2
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:2578   CAUGUGGAUUGAGUGGGAUUGGAU   2601

2.5 PREDICTED: Zea mays lectin-like receptor kinase 7 (LOC100281599), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020551708.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:4881   CAUGUGGAUUGAGUGGGAUUGGAU   4904

2.5 PREDICTED: Zea mays hypothetical protein (LOC100384203), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020550015.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:4183   CAUGUGGAUUGAGUGGGAUUGGAU   4206

2.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020550018.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:4087   CAUGUGGAUUGAGUGGGAUUGGAU   4110

2.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020551710.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:3246   CAUGUGGAUUGAGUGGGAUUGGAU   3269

2.5 PREDICTED: Zea mays hypothetical protein (LOC100384203), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020550016.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:3763   CAUGUGGAUUGAGUGGGAUUGGAU   3786

2.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020550019.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:3688   CAUGUGGAUUGAGUGGGAUUGGAU   3711

2.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X5, mRNA NA coding protein psRNATarget
XM_020550017.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:3701   CAUGUGGAUUGAGUGGGAUUGGAU   3724

2.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020550020.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:3693   CAUGUGGAUUGAGUGGGAUUGGAU   3716

2.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X6, mRNA NA coding protein psRNATarget
XM_020550021.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:3699   CAUGUGGAUUGAGUGGGAUUGGAU   3722

2.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020550024.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:3645   CAUGUGGAUUGAGUGGGAUUGGAU   3668

2.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X10, mRNA NA coding protein psRNATarget
XM_020550022.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:3621   CAUGUGGAUUGAGUGGGAUUGGAU   3644

2.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X8, mRNA NA coding protein psRNATarget
BT018572.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:1774   CAUGUGGAUUGAGUGGGAUUGGAU   1797

2.5 Zea mays clone EL01N0443D02.d mRNA sequence NA coding protein psRNATarget
EU964623.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:1450   CAUGUGGAUUGAGUGGGAUUGGAU   1473

2.5 Zea mays clone 280415 sorting nexin 1 mRNA, complete cds NA coding protein psRNATarget
AY103588.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:1427   CAUGUGGAUUGAGUGGGAUUGGAU   1450

2.5 Zea mays PCO114222 mRNA sequence NA coding protein psRNATarget
BT066364.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:1458   CAUGUGGAUUGAGUGGGAUUGGAU   1481

2.5 Zea mays full-length cDNA clone ZM_BFc0009H06 mRNA, complete cds NA coding protein psRNATarget
NM_001175812.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:1458   CAUGUGGAUUGAGUGGGAUUGGAU   1481

2.5 Zea mays uncharacterized LOC100383146 (LOC100383146), mRNA NA coding protein psRNATarget
EU966290.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:1453   CAUGUGGAUUGAGUGGGAUUGGAU   1476

2.5 Zea mays clone 293206 pyruvate dehydrogenase E1 component alpha subunit mRNA, complete cds NA coding protein psRNATarget
NM_001156787.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:1453   CAUGUGGAUUGAGUGGGAUUGGAU   1476

2.5 Zea mays pyruvate dehydrogenase E1 component alpha subunit (LOC100283889), mRNA NA coding protein psRNATarget
EU966790.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:1409   CAUGUGGAUUGAGUGGGAUUGGAU   1432

2.5 Zea mays clone 297432 pyruvate dehydrogenase E1 component alpha subunit mRNA, complete cds NA coding protein psRNATarget
EU962948.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:1409   CAUGUGGAUUGAGUGGGAUUGGAU   1432

2.5 Zea mays clone 246807 pyruvate dehydrogenase E1 component alpha subunit mRNA, complete cds NA coding protein psRNATarget
BT086570.2
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:151   CAUGUGGAUUGAGUGGGAUUGGAU   174

2.5 Zea mays full-length cDNA clone ZM_BFc0184M19 mRNA, complete cds NA coding protein psRNATarget
EU960828.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:931   CAUGUGGAUUGAGUGGGAUUGGAU   954

2.5 Zea mays clone 228913 exosome complex exonuclease RRP41 mRNA, complete cds NA coding protein psRNATarget
BT017852.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:874   CAUGUGGAUUGAGUGGGAUUGGAU   897

2.5 Zea mays clone EL01N0511C01.c mRNA sequence NA coding protein psRNATarget
AY105812.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:973   CAUGUGGAUUGAGUGGGAUUGGAU   996

2.5 Zea mays PCO140232 mRNA sequence NA coding protein psRNATarget
BT061688.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:922   CAUGUGGAUUGAGUGGGAUUGGAU   945

2.5 Zea mays full-length cDNA clone ZM_BFb0175E10 mRNA, complete cds NA coding protein psRNATarget
AY111036.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:110   CAUGUGGAUUGAGUGGGAUUGGAU   133

2.5 Zea mays CL1582_4 mRNA sequence NA coding protein psRNATarget
EU968099.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:160   CAUGUGGAUUGAGUGGGAUUGGAU   183

2.5 Zea mays clone 314232 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
EU946745.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:486   CAUGUGGAUUGAGUGGGAUUGGAU   509

2.5 Zea mays clone 323251 mRNA sequence NA coding protein psRNATarget
HI405822.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:27   CAUGUGGAUUGAGUGGGAUUGGAU   50

2.5 Sequence 3947 from Patent EP2074227 NA coding protein psRNATarget
HI405822.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:167   CAUGUGGAUUGAGUGGGAUUGGAU   190

2.5 Sequence 3947 from Patent EP2074227 NA coding protein psRNATarget
LQ237952.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:27   CAUGUGGAUUGAGUGGGAUUGGAU   50

2.5 Sequence 3947 from Patent EP2985353 NA coding protein psRNATarget
LQ237952.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:167   CAUGUGGAUUGAGUGGGAUUGGAU   190

2.5 Sequence 3947 from Patent EP2985353 NA coding protein psRNATarget
JB166283.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:27   CAUGUGGAUUGAGUGGGAUUGGAU   50

2.5 Sequence 3947 from Patent EP2559767 NA coding protein psRNATarget
JB166283.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:167   CAUGUGGAUUGAGUGGGAUUGGAU   190

2.5 Sequence 3947 from Patent EP2559767 NA coding protein psRNATarget
LQ235117.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:36   CAUGUGGAUUGAGUGGGAUUGGAU   59

2.5 Sequence 1112 from Patent EP2985353 NA coding protein psRNATarget
JB163448.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:36   CAUGUGGAUUGAGUGGGAUUGGAU   59

2.5 Sequence 1112 from Patent EP2559767 NA coding protein psRNATarget
HI402987.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:36   CAUGUGGAUUGAGUGGGAUUGGAU   59

2.5 Sequence 1112 from Patent EP2074227 NA coding protein psRNATarget
LQ237959.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:27   CAUGUGGAUUGAGUGGGAUUGGAU   50

2.5 Sequence 3954 from Patent EP2985353 NA coding protein psRNATarget
HI405829.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:27   CAUGUGGAUUGAGUGGGAUUGGAU   50

2.5 Sequence 3954 from Patent EP2074227 NA coding protein psRNATarget
JB166290.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:27   CAUGUGGAUUGAGUGGGAUUGGAU   50

2.5 Sequence 3954 from Patent EP2559767 NA coding protein psRNATarget
HI405851.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:27   CAUGUGGAUUGAGUGGGAUUGGAU   50

2.5 Sequence 3976 from Patent EP2074227 NA coding protein psRNATarget
HI405848.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:27   CAUGUGGAUUGAGUGGGAUUGGAU   50

2.5 Sequence 3973 from Patent EP2074227 NA coding protein psRNATarget
LQ237978.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:27   CAUGUGGAUUGAGUGGGAUUGGAU   50

2.5 Sequence 3973 from Patent EP2985353 NA coding protein psRNATarget
LQ237953.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:27   CAUGUGGAUUGAGUGGGAUUGGAU   50

2.5 Sequence 3948 from Patent EP2985353 NA coding protein psRNATarget
JB166312.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:27   CAUGUGGAUUGAGUGGGAUUGGAU   50

2.5 Sequence 3976 from Patent EP2559767 NA coding protein psRNATarget
HI405835.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:27   CAUGUGGAUUGAGUGGGAUUGGAU   50

2.5 Sequence 3960 from Patent EP2074227 NA coding protein psRNATarget
JB166309.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:27   CAUGUGGAUUGAGUGGGAUUGGAU   50

2.5 Sequence 3973 from Patent EP2559767 NA coding protein psRNATarget
LQ237965.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:27   CAUGUGGAUUGAGUGGGAUUGGAU   50

2.5 Sequence 3960 from Patent EP2985353 NA coding protein psRNATarget
JB166284.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:27   CAUGUGGAUUGAGUGGGAUUGGAU   50

2.5 Sequence 3948 from Patent EP2559767 NA coding protein psRNATarget
LQ237981.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:27   CAUGUGGAUUGAGUGGGAUUGGAU   50

2.5 Sequence 3976 from Patent EP2985353 NA coding protein psRNATarget
JB166296.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:27   CAUGUGGAUUGAGUGGGAUUGGAU   50

2.5 Sequence 3960 from Patent EP2559767 NA coding protein psRNATarget
HI405823.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:27   CAUGUGGAUUGAGUGGGAUUGGAU   50

2.5 Sequence 3948 from Patent EP2074227 NA coding protein psRNATarget
LQ237967.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:27   CAUGUGGAUUGAGUGGGAUUGGAU   50

2.5 Sequence 3962 from Patent EP2985353 NA coding protein psRNATarget
HI405837.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:27   CAUGUGGAUUGAGUGGGAUUGGAU   50

2.5 Sequence 3962 from Patent EP2074227 NA coding protein psRNATarget
LQ237974.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:27   CAUGUGGAUUGAGUGGGAUUGGAU   50

2.5 Sequence 3969 from Patent EP2985353 NA coding protein psRNATarget
HI405844.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:27   CAUGUGGAUUGAGUGGGAUUGGAU   50

2.5 Sequence 3969 from Patent EP2074227 NA coding protein psRNATarget
JB166305.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:27   CAUGUGGAUUGAGUGGGAUUGGAU   50

2.5 Sequence 3969 from Patent EP2559767 NA coding protein psRNATarget
JB166298.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:27   CAUGUGGAUUGAGUGGGAUUGGAU   50

2.5 Sequence 3962 from Patent EP2559767 NA coding protein psRNATarget
LQ238006.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:25   CAUGUGGAUUGAGUGGGAUUGGAU   48

2.5 Sequence 4001 from Patent EP2985353 NA coding protein psRNATarget
JB166337.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:25   CAUGUGGAUUGAGUGGGAUUGGAU   48

2.5 Sequence 4001 from Patent EP2559767 NA coding protein psRNATarget
HI405876.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:25   CAUGUGGAUUGAGUGGGAUUGGAU   48

2.5 Sequence 4001 from Patent EP2074227 NA coding protein psRNATarget
HI405827.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:23   CAUGUGGAUUGAGUGGGAUUGGAU   46

2.5 Sequence 3952 from Patent EP2074227 NA coding protein psRNATarget
LQ237957.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:23   CAUGUGGAUUGAGUGGGAUUGGAU   46

2.5 Sequence 3952 from Patent EP2985353 NA coding protein psRNATarget
JB166288.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:23   CAUGUGGAUUGAGUGGGAUUGGAU   46

2.5 Sequence 3952 from Patent EP2559767 NA coding protein psRNATarget
LQ238018.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:16   CAUGUGGAUUGAGUGGGAUUGGAU   39

2.5 Sequence 4013 from Patent EP2985353 NA coding protein psRNATarget
HI405888.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:16   CAUGUGGAUUGAGUGGGAUUGGAU   39

2.5 Sequence 4013 from Patent EP2074227 NA coding protein psRNATarget
JB166349.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:16   CAUGUGGAUUGAGUGGGAUUGGAU   39

2.5 Sequence 4013 from Patent EP2559767 NA coding protein psRNATarget
LQ238025.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:16   CAUGUGGAUUGAGUGGGAUUGGAU   39

2.5 Sequence 4020 from Patent EP2985353 NA coding protein psRNATarget
HI405895.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:16   CAUGUGGAUUGAGUGGGAUUGGAU   39

2.5 Sequence 4020 from Patent EP2074227 NA coding protein psRNATarget
JB166356.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:16   CAUGUGGAUUGAGUGGGAUUGGAU   39

2.5 Sequence 4020 from Patent EP2559767 NA coding protein psRNATarget
JB163754.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:13   CAUGUGGAUUGAGUGGGAUUGGAU   36

2.5 Sequence 1418 from Patent EP2559767 NA coding protein psRNATarget
HI403335.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:13   CAUGUGGAUUGAGUGGGAUUGGAU   36

2.5 Sequence 1460 from Patent EP2074227 NA coding protein psRNATarget
JB163796.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:13   CAUGUGGAUUGAGUGGGAUUGGAU   36

2.5 Sequence 1460 from Patent EP2559767 NA coding protein psRNATarget
HI403293.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:13   CAUGUGGAUUGAGUGGGAUUGGAU   36

2.5 Sequence 1418 from Patent EP2074227 NA coding protein psRNATarget
LQ235423.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:13   CAUGUGGAUUGAGUGGGAUUGGAU   36

2.5 Sequence 1418 from Patent EP2985353 NA coding protein psRNATarget
LQ235465.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:13   CAUGUGGAUUGAGUGGGAUUGGAU   36

2.5 Sequence 1460 from Patent EP2985353 NA coding protein psRNATarget
HI403334.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:13   CAUGUGGAUUGAGUGGGAUUGGAU   36

2.5 Sequence 1459 from Patent EP2074227 NA coding protein psRNATarget
LQ235464.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:13   CAUGUGGAUUGAGUGGGAUUGGAU   36

2.5 Sequence 1459 from Patent EP2985353 NA coding protein psRNATarget
JB163795.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||||=||||||||
targets:13   CAUGUGGAUUGAGUGGGAUUGGAU   36

2.5 Sequence 1459 from Patent EP2559767 NA coding protein psRNATarget
XM_020543935.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  *||=||||||=||||=||||||||
targets:223   AAUGUGGAUUGAGUGGGAUUGGAU   246

2.5 PREDICTED: Zea mays pentatricopeptide repeat-containing protein At5g39710 (LOC103638071), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020543936.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  *||=||||||=||||=||||||||
targets:223   AAUGUGGAUUGAGUGGGAUUGGAU   246

2.5 PREDICTED: Zea mays pentatricopeptide repeat-containing protein At5g39710 (LOC103638071), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020543937.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  *||=||||||=||||=||||||||
targets:223   AAUGUGGAUUGAGUGGGAUUGGAU   246

2.5 PREDICTED: Zea mays pentatricopeptide repeat-containing protein At5g39710 (LOC103638071), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020543938.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  *||=||||||=||||=||||||||
targets:223   AAUGUGGAUUGAGUGGGAUUGGAU   246

2.5 PREDICTED: Zea mays pentatricopeptide repeat-containing protein At5g39710 (LOC103638071), transcript variant X5, mRNA NA coding protein psRNATarget
NM_001147267.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=|||||||||*|||
targets:1477   CAUGUGGAUUGAGUGAGAUUAGAU   1500

2.5 Zea mays UDP-glycosyltransferase 91A1 (gpm263), mRNA NA coding protein psRNATarget
BT039499.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=|||||||||*|||
targets:1477   CAUGUGGAUUGAGUGAGAUUAGAU   1500

2.5 Zea mays full-length cDNA clone ZM_BFc0016E06 mRNA, complete cds NA coding protein psRNATarget
XM_008666573.2
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=||*||||||||||
targets:1314   CAUGUGGAUUGAGCGAGAUUGGAU   1337

2.5 PREDICTED: Zea mays putative acyl-CoA N-acyltransferases (NAT) family protein (LOC103643400), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008658927.2
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=|*|||||||||||
targets:333   CAUGUGGAUUGAAUGAGAUUGGAU   356

2.5 PREDICTED: Zea mays uncharacterized LOC103636575 (LOC103636575), mRNA NA coding protein psRNATarget
JB166297.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=|||||||||*|||
targets:27   CAUGUGGAUUGAGUGAGAUUAGAU   50

2.5 Sequence 3961 from Patent EP2559767 NA coding protein psRNATarget
LQ237966.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=|||||||||*|||
targets:27   CAUGUGGAUUGAGUGAGAUUAGAU   50

2.5 Sequence 3961 from Patent EP2985353 NA coding protein psRNATarget
HI405836.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  |||=||||||=|||||||||*|||
targets:27   CAUGUGGAUUGAGUGAGAUUAGAU   50

2.5 Sequence 3961 from Patent EP2074227 NA coding protein psRNATarget
HI405925.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  ||*|||||||=||||=||||||||
targets:11   CACAUGGAUUGAGUGGGAUUGGAU   34

2.5 Sequence 4050 from Patent EP2074227 NA coding protein psRNATarget
JB166386.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  ||*|||||||=||||=||||||||
targets:11   CACAUGGAUUGAGUGGGAUUGGAU   34

2.5 Sequence 4050 from Patent EP2559767 NA coding protein psRNATarget
LQ238055.1
ncRNA:24   GUAUACCUAAUUCACUCUAACCUA   1
  ||*|||||||=||||=||||||||
targets:11   CACAUGGAUUGAGUGGGAUUGGAU   34

2.5 Sequence 4050 from Patent EP2985353 NA coding protein psRNATarget
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