ncRNA ID | osa-miRf10169-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 23 |
Mature sequence(if miRNA) | NA - AUCGAUCUUCGCAUGCGGCUGGG - NA |
Stem-loop(if miRNA) |
    ----    A                   C   GA     -      A -        AUC GCAU    GUGA GAUCGAUCUUCGCAUGCGG UGG  CGGCC GCAUGC C AAAUGGUG   U ||||    |||| ||||||||||||||||||| |||  ||||| |||||| | ||||||||   U CGUA    CGCU UUAGCUAGAAGUGUACGCC ACC  GCCGG UGUACG G UUUACCAU   U     UGCC    -                   A   -G     G      C C        ACG |
Stem-loop sequence | GCAUGUGAAGAUCGAUCUUCGCAUGCGGCUGGGACGGCCGCAUGCACAAAUGGUGAUCUUUGCAUACCAUUUCGCGCAUGUGGGCCGGCCAACCGCAUGUGAAGAUCGAUUUCGCCCGUAUGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LQ236585.1 |
|
2.5 | Sequence 2580 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
JB164916.1 |
|
2.5 | Sequence 2580 from Patent EP2559767 | NA | coding protein | psRNATarget | |||||||||
HI404455.1 |
|
2.5 | Sequence 2580 from Patent EP2074227 | NA | coding protein | psRNATarget |