ncRNA ID | novel_zma_miR5712 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:139730192-139730264 [+] |
Reference genome | RefGen_v4 |
Source | SRR2638137 |
Length | 24 |
Mature sequence(if miRNA) | 50 - GGUAAUCUGGAACGGAACGGUUCU - 73 |
Stem-loop(if miRNA) |
--         -A   CU    -     A       CG   AGCCGUUCC  UCC  GAUU CUAGG ACGGAGC  C   |||||||||  |||  |||| ||||| |||||||   UUGGCAAGG  AGG  CUAA GGUUU UGUCUUG  U UC         CA   -U    U     G       UC |
Stem-loop sequence | AGCCGUUCCAUCCCUGAUUCUAGGAACGGAGCCGCUCUGUUCUGUGUUUGGUAAUCUGGAACGGAACGGUUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020542520.1 |
|
2.0 | PREDICTED: Zea mays putative ubiquitin-conjugating enzyme E2 38 (LOC100502147), transcript variant X2, mRNA | NA | coding protein | psRNATarget |