ncRNA ID | novel_zma_miR5711 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:89032031-89032272 [+] |
Reference genome | RefGen_v4 |
Source | SRR2638137;SRR2647387 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACGUAUCUGGUGCAAACCAACUCC - 24 |
Stem-loop(if miRNA) |
--                                 C                   AA                   GGG  U         G GUG   GG ---G G      AA AA   GAU   ACGUAUCUGGUGCAAACCAACUCCUCCGUGCAA CGUGCAAACUUUUAAUCUG  CCACAUGAUGUUGAUCCAA   GG GUGCGGGGG G   GGA  G    G AUUUGA  A  UGU   U   ||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||   || ||||||||| |   |||  |    | ||||||  |  |||   UGCAUAGACCACGUUUGGUUGGGGAGGUACGUU GCACGUUUGAAGAUUAGAC  GGUGUACUACAACUAGGUU   CC UAUGUCCCU C   CCU  U    U UGAAUU  U  GCG   A CU                                 A                   CC                   --A  -         G --A   AU AAAA G      GG GG   ACG |
Stem-loop sequence | ACGUAUCUGGUGCAAACCAACUCCUCCGUGCAACCGUGCAAACUUUUAAUCUGAACCACAUGAUGUUGAUCCAAGGGGGUGUGCGGGGGGGGUGGGAGGGGGGAUUUGAAAAAAUGUGAUUAGCAGCGGGUGGUUAAGUGUAAAAUUAUCCACGUCCCUGUAUCCAUUGGAUCAACAUCAUGUGGCCCAGAUUAGAAGUUUGCACGAUUGCAUGGAGGGGUUGGUUUGCACCAGAUACGUUC |