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BaseInfo

ncRNA ID novel_zma_miR5711
Species Zea mays
Class miRNA
Genome position Chr4:89032031-89032272 [+]
Reference genome RefGen_v4
Source SRR2638137;SRR2647387
Length 24
Mature sequence(if miRNA) 1 - ACGUAUCUGGUGCAAACCAACUCC - 24
Stem-loop(if miRNA) --                                 C                   AA                   GGG  U         G GUG   GG ---G G      AA AA   GAU
  ACGUAUCUGGUGCAAACCAACUCCUCCGUGCAA CGUGCAAACUUUUAAUCUG  CCACAUGAUGUUGAUCCAA   GG GUGCGGGGG G   GGA  G    G AUUUGA  A  UGU   U
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  UGCAUAGACCACGUUUGGUUGGGGAGGUACGUU GCACGUUUGAAGAUUAGAC  GGUGUACUACAACUAGGUU   CC UAUGUCCCU C   CCU  U    U UGAAUU  U  GCG   A
CU                                 A                   CC                   --A  -         G --A   AU AAAA G      GG GG   ACG
Stem-loop sequence ACGUAUCUGGUGCAAACCAACUCCUCCGUGCAACCGUGCAAACUUUUAAUCUGAACCACAUGAUGUUGAUCCAAGGGGGUGUGCGGGGGGGGUGGGAGGGGGGAUUUGAAAAAAUGUGAUUAGCAGCGGGUGGUUAAGUGUAAAAUUAUCCACGUCCCUGUAUCCAUUGGAUCAACAUCAUGUGGCCCAGAUUAGAAGUUUGCACGAUUGCAUGGAGGGGUUGGUUUGCACCAGAUACGUUC