ncRNA ID | novel_zma_miR5709 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:196071012-196071188 [-] |
Reference genome | RefGen_v4 |
Source | SRR1618883;SRR1745812;SRR5105959 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUUCUGGUUUGCAGUCGGCUGCAC - 24 |
Stem-loop(if miRNA) |
--                          AC  C                          C   UGCA GU     AG  AACGUUUUAGUU   GCAGCCGGCUGCAAACUAGAAUGUUU  GG CUCUCACAAAAAAGGAGGAUUGAUCC ACC    G  CCACC  AU            G   ||||||||||||||||||||||||||  || |||||||||||||||||||||||||| |||    |  |||||  ||   CGUCGGCUGACGUUUGGUCUUACAAA  UC GGGAGUGUUUUUUCCUCCUAACUGGG UGG    C  GGUGG  CG            U CA                          CA  A                          U   ---- UG     -G  UCGUCGUUAUUG |
Stem-loop sequence | GCAGCCGGCUGCAAACUAGAAUGUUUACGGCCUCUCACAAAAAAGGAGGAUUGAUCCCACCUGCAGGUCCACCAGAUAACGUUUUAGUUGUGUUAUUGCUGCUGCGGGUGGGUCGGUUGGGUCAAUCCUCCUUUUUUGUGAGGGACUACAAACAUUCUGGUUUGCAGUCGGCUGCAC |