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BaseInfo

ncRNA ID novel_zma_miR5709
Species Zea mays
Class miRNA
Genome position Chr5:196071012-196071188 [-]
Reference genome RefGen_v4
Source SRR1618883;SRR1745812;SRR5105959
Length 24
Mature sequence(if miRNA) 1 - AUUCUGGUUUGCAGUCGGCUGCAC - 24
Stem-loop(if miRNA) --                          AC  C                          C   UGCA GU     AG  AACGUUUUAGUU
  GCAGCCGGCUGCAAACUAGAAUGUUU  GG CUCUCACAAAAAAGGAGGAUUGAUCC ACC    G  CCACC  AU            G
  ||||||||||||||||||||||||||  || |||||||||||||||||||||||||| |||    |  |||||  ||
  CGUCGGCUGACGUUUGGUCUUACAAA  UC GGGAGUGUUUUUUCCUCCUAACUGGG UGG    C  GGUGG  CG            U
CA                          CA  A                          U   ---- UG     -G  UCGUCGUUAUUG
Stem-loop sequence GCAGCCGGCUGCAAACUAGAAUGUUUACGGCCUCUCACAAAAAAGGAGGAUUGAUCCCACCUGCAGGUCCACCAGAUAACGUUUUAGUUGUGUUAUUGCUGCUGCGGGUGGGUCGGUUGGGUCAAUCCUCCUUUUUUGUGAGGGACUACAAACAUUCUGGUUUGCAGUCGGCUGCAC