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BaseInfo

ncRNA ID novel_zma_miR5708
Species Zea mays
Class miRNA
Genome position Chr1:50053084-50053137 [-]
Reference genome RefGen_v4
Source SRR1583941;SRR1583942
Length 21
Mature sequence(if miRNA) 1 - GAGGACUGUCUUGUUUGCGCA - 21
Stem-loop(if miRNA) --         U   -U      --   G
  CGUAAGCAA GAC  UUCUCU  GCU G
  ||||||||| |||  ||||||  |||
  GCGUUUGUU CUG  AGGAGG  UGG U
AC         -   UC      AG   C
Stem-loop sequence CGUAAGCAAUGACUUUCUCUGCUGGUCGGUGAGGAGGACUGUCUUGUUUGCGCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008666835.2
ncRNA:21   ACGCGUUUGUUCUGUCAGGAG   1
  |*|*|||||||||||*|||||
targets:2251   UUCUCAAACAAGACAAUCCUC   2271

2.5 PREDICTED: Zea mays scarecrow-like protein 34 (LOC103643668), mRNA NA coding protein psRNATarget