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BaseInfo

ncRNA ID	novel_zma_miR5703
Species	Zea mays
Class	miRNA
Genome position	Chr4:123411249-123411317 [-]
Reference genome	RefGen_v4
Source	SRR2638137;SRR2647343
Length	22
Mature sequence(if miRNA)	1 - UCAUGUAUUUCUUCAUCUAGGG - 22
Stem-loop(if miRNA)	CUGGAUCAAGAAAG           --  -C   -     U               UAGAUGAGGAA  GC  GAU GGGUA G               |||||||||||  ||  ||| |||||               AUCUACUUCUU  UG  CUA CCCAU A -----------GGG           UA  UA   U     U
Stem-loop sequence	CUGGAUCAAGAAAGUAGAUGAGGAAGCCGAUGGGUAUGAUUACCCUAUCAUGUAUUUCUUCAUCUAGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008681058.2	ncRNA:22   GGGAUCUACUUCUUUAUGUACU   1   ***|=||||=|||||||||||| targets:1202   AAGUGGAUGGAGAAAUACAUGA   1223 Target Full Sequence	2.5	PREDICTED: Zea mays pollenless 3 (LOC100284905), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008681051.2	ncRNA:22   GGGAUCUACUUCUUUAUGUACU   1   ***|=||||=|||||||||||| targets:1251   AAGUGGAUGGAGAAAUACAUGA   1272 Target Full Sequence	2.5	PREDICTED: Zea mays pollenless 3 (LOC100284905), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020542627.1	ncRNA:22   GGGAUCUACUUCUUUAUGUACU   1   |**||||||||||||||*|||| targets:191   CAGUAGAUGAAGAAAUAGAUGA   212 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC109941546 (LOC109941546), mRNA	NA	coding protein	psRNATarget
XM_020542967.1	ncRNA:22   GGGAUCUACUUCUUUAUGUACU   1   =*=|||||||||||||*||||= targets:694   UAUUAGAUGAAGAAAUUCAUGG   715 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103636910 (LOC103636910), mRNA	NA	coding protein	psRNATarget
EZ065676.1	ncRNA:22   GGGAUCUACUUCUUUAUGUACU   1   |***|||*|||||||||||||| targets:23   CAAAAGAGGAAGAAAUACAUGA   44 Target Full Sequence	2.0	TSA: Zea mays contig01309, mRNA sequence	NA	coding protein	psRNATarget