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BaseInfo

ncRNA ID	novel_zma_miR5702
Species	Zea mays
Class	miRNA
Genome position	Chr10:81536388-81536438 [+]
Reference genome	RefGen_v4
Source	SRR2638137
Length	24
Mature sequence(if miRNA)	1 - CUAGAUCUCGCCUCUCAGGAGGGA - 24
Stem-loop(if miRNA)	--    -     G      A GA  G   CUAG AUCUC CCUCUC G  GG A   |||| ||||| |||||| |  ||   GAUC UAGAG GGAGGG C  CC C GG    C     A      G UG  C
Stem-loop sequence	CUAGAUCUCGCCUCUCAGGAGGGACCCCGUCGGGGAGGAGAGAUCCUAGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ068231.1	ncRNA:24   AGGGAGGACUCUCCGCUCUAGAUC   1   *=*=||||||*||||*|||||||| targets:211   CUGUUCCUGAAAGGCUAGAUCUAG   234 Target Full Sequence	2.5	TSA: Zea mays contig03866, mRNA sequence	NA	coding protein	psRNATarget
AY105425.1	ncRNA:24   AGGGAGGACUCUCCGCUCUAGAUC   1   *=*=||||||*||||*|||||||| targets:889   CUGUUCCUGAAAGGCUAGAUCUAG   912 Target Full Sequence	2.5	Zea mays PCO111089 mRNA sequence	NA	coding protein	psRNATarget
BT055359.1	ncRNA:24   AGGGAGGACUCUCCGCUCUAGAUC   1   *=*=||||||*||||*|||||||| targets:862   CUGUUCCUGAAAGGCUAGAUCUAG   885 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0071G16 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008674058.1	ncRNA:24   AGGGAGGACUCUCCGCUCUAGAUC   1   *=*=||||||*||||*|||||||| targets:905   CUGUUCCUGAAAGGCUAGAUCUAG   928 Target Full Sequence	2.5	PREDICTED: Zea mays receptor expression-enhancing protein 6 (LOC100217041), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020549528.1	ncRNA:24   AGGGAGGACUCUCCGCUCUAGAUC   1   *=*=||||||*||||*|||||||| targets:905   CUGUUCCUGAAAGGCUAGAUCUAG   928 Target Full Sequence	2.5	PREDICTED: Zea mays receptor expression-enhancing protein 6 (LOC100217041), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EU962261.1	ncRNA:24   AGGGAGGACUCUCCGCUCUAGAUC   1   *=*=||||||*||||*|||||||| targets:902   CUGUUCCUGAAAGGCUAGAUCUAG   925 Target Full Sequence	2.5	Zea mays clone 241353 receptor expression-enhancing protein 6 mRNA, complete cds	NA	coding protein	psRNATarget
BT037817.1	ncRNA:24   AGGGAGGACUCUCCGCUCUAGAUC   1   *=*=||||||*||||*|||||||| targets:1785   CUGUUCCUGAAAGGCUAGAUCUAG   1808 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0197P14 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001143413.1	ncRNA:24   AGGGAGGACUCUCCGCUCUAGAUC   1   *=*=||||||*||||*|||||||| targets:1785   CUGUUCCUGAAAGGCUAGAUCUAG   1808 Target Full Sequence	2.5	Zea mays receptor expression-enhancing protein 6 (LOC100217041), mRNA	NA	coding protein	psRNATarget