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BaseInfo

ncRNA ID osa-miRf10167-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - GCUGUUUGGGUGAGCUUCUAGC - NA
Stem-loop(if miRNA)     AG         U            A   G ---    C
GCUG  CUGUUUGGG GAGCUUCUAGCA CUG A   UAUU U
||||  ||||||||| |||||||||||| ||| |   ||||
CGAC  GAUAAACCC CUCGAAGAUCGU GAC U   AUAG U
    CA         C            C   G CGA    G
Stem-loop sequence GCUGAGCUGUUUGGGUGAGCUUCUAGCAACUGGAUAUUCUUGGAUAAGCUGCAGCUGCUAGAAGCUCCCCCAAAUAGACCAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
CT835762.1
ncRNA:22   CGAUCUUCGAGUGGGUUUGUCG   1
  *=|||||||||||||||||||=
targets:210   AUUAGAAGCUCACCCAAACAGU   231

1.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA130D09, full insert sequence NA coding protein psRNATarget
CT835754.1
ncRNA:22   CGAUCUUCGAGUGGGUUUGUCG   1
  *=|||||||||||||||||||=
targets:470   AUUAGAAGCUCACCCAAACAGU   491

1.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA105K05, full insert sequence NA coding protein psRNATarget
XM_015795922.1
ncRNA:22   CGAUCUUCGAGUGGGUUUGUCG   1
  ||*||||||||*|||||||||*
targets:668   GCGAGAAGCUCUCCCAAACAGG   689

2.5 PREDICTED: Oryza sativa Japonica Group putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 (LOC9270998), transcript variant X2, mRNA putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130(LOC9270998) coding protein psRNATarget
XM_015795921.1
ncRNA:22   CGAUCUUCGAGUGGGUUUGUCG   1
  ||*||||||||*|||||||||*
targets:758   GCGAGAAGCUCUCCCAAACAGG   779

2.5 PREDICTED: Oryza sativa Japonica Group putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 (LOC9270998), transcript variant X1, mRNA putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130(LOC9270998) coding protein psRNATarget
XM_015795923.1
ncRNA:22   CGAUCUUCGAGUGGGUUUGUCG   1
  ||*||||||||*|||||||||*
targets:898   GCGAGAAGCUCUCCCAAACAGG   919

2.5 PREDICTED: Oryza sativa Japonica Group putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 (LOC9270998), transcript variant X3, mRNA putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130(LOC9270998) coding protein psRNATarget