ncRNA ID | novel_zma_miR5699 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:206872186-206872297 [-] |
Reference genome | RefGen_v4 |
Source | SRR1618883 |
Length | 24 |
Mature sequence(if miRNA) | 89 - CUCACAUUCGUGACCUGUAGGCCC - 112 |
Stem-loop(if miRNA) |
--                     C    --A        UCACAA      --   AACA   CUCACAUUCGUGACCUGUAGG CCAC   AACAGAAG      GAAGCC  CCA    A   ||||||||||||||||||||| ||||   ||||||||      ||||||  |||   GAGUGUAAGCACUGGACGUCC GGUG   UUGUUUUU      CUUCGG  GGU    C GG                     C    CAC        ----UA      AU   GAAC |
Stem-loop sequence | CUCACAUUCGUGACCUGUAGGCCCACAAACAGAAGUCACAAGAAGCCCCAAACAACCAAGUGGUAGGCUUCAUUUUUUGUUCACGUGGCCCUGCAGGUCACGAAUGUGAGGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008654183.2 |
|
2.0 | PREDICTED: Zea mays probable LRR receptor-like serine/threonine-protein kinase At4g37250 (LOC103632364), mRNA | NA | coding protein | psRNATarget |