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BaseInfo

ncRNA ID novel_zma_miR5695
Species Zea mays
Class miRNA
Genome position Chr4:171060378-171060478 [+]
Reference genome RefGen_v4
Source SRR2638137
Length 23
Mature sequence(if miRNA) 79 - GAGGACGACUCCAAUUCAAGAGA - 101
Stem-loop(if miRNA) --   A  UU        A    - AC   UAACA     GA    AA   AU
  UCU GA  UUGGGGUU GUCC C  CUU     UUUCA  UUUG  GCC  A
  ||| ||  |||||||| |||| |  |||     |||||  ||||  |||  U
  AGA CU  AACCUCAG CAGG G  GAG     AGAGU  AAGC  UGG  A
AG   A  -U        -    A CU   ---CC     AG    AG   GU
Stem-loop sequence UCUAGAUUUUGGGGUUAGUCCCACCUUUAACAUUUCAGAUUUGAAGCCAUAUAUGGGUGACGAAGAUGAGACCGAGUCGAGGACGACUCCAAUUCAAGAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT062281.2
ncRNA:23   AGAGAACUUAACCUCAGCAGGAG   1
  *|*||||||||||||||*||||*
targets:580   CCACUUGAAUUGGAGUCAUCCUG   602

2.5 Zea mays full-length cDNA clone ZM_BFb0274N02 mRNA, complete cds NA coding protein psRNATarget