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BaseInfo

ncRNA ID novel_zma_miR5693
Species Zea mays
Class miRNA
Genome position Chr4:167760886-167761071 [+]
Reference genome RefGen_v4
Source SRR2638137;SRR2647221
Length 24
Mature sequence(if miRNA) 1 - AAAAUAUCUUAUGUCCGACGGCUA - 24
Stem-loop(if miRNA) --      UCU           G    ---CAG      C  ------  -           U          CU      ACA   A   AAC    G
  AAAAUA   UAUGUCCGACG CUAU      UUCGGC GU      CG GACGUAAGCUU UGUCCGACGG  UCUCUG   GCC UCG   AUAA A
  ||||||   ||||||||||| ||||      |||||| ||      || ||||||||||| ||||||||||  ||||||   ||| |||   ||||
  UUUUGU   GUGUAGGCUGC GGUG      AAGCUG CG      GC CUGUAUUCGAA AUAGGCUGCC  AGAGAC   CGG AGC   UAUU C
CA      UAC           G    AAUUGG      U  AUAGAU  U           U          --      GAC   G   CUU    G
Stem-loop sequence AAAAUAUCUUAUGUCCGACGGCUAUCAGUUCGGCCGUCGGACGUAAGCUUUUGUCCGACGGCUUCUCUGACAGCCAUCGAACAUAAGACGUUAUUUCCGAGGGCCAGCAGAGACCGUCGGAUAUAAGCUUAUGUCUCGUAGAUAGCUGUCGAAGGUUAAGUGGGCGUCGGAUGUGCAUUGUUUUAC