ncRNA ID | novel_zma_miR5693 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:167760886-167761071 [+] |
Reference genome | RefGen_v4 |
Source | SRR2638137;SRR2647221 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAAUAUCUUAUGUCCGACGGCUA - 24 |
Stem-loop(if miRNA) |
--      UCU           G    ---CAG      C  ------  -           U          CU      ACA   A   AAC    G   AAAAUA   UAUGUCCGACG CUAU      UUCGGC GU      CG GACGUAAGCUU UGUCCGACGG  UCUCUG   GCC UCG   AUAA A   ||||||   ||||||||||| ||||      |||||| ||      || ||||||||||| ||||||||||  ||||||   ||| |||   ||||   UUUUGU   GUGUAGGCUGC GGUG      AAGCUG CG      GC CUGUAUUCGAA AUAGGCUGCC  AGAGAC   CGG AGC   UAUU C CA      UAC           G    AAUUGG      U  AUAGAU  U           U          --      GAC   G   CUU    G |
Stem-loop sequence | AAAAUAUCUUAUGUCCGACGGCUAUCAGUUCGGCCGUCGGACGUAAGCUUUUGUCCGACGGCUUCUCUGACAGCCAUCGAACAUAAGACGUUAUUUCCGAGGGCCAGCAGAGACCGUCGGAUAUAAGCUUAUGUCUCGUAGAUAGCUGUCGAAGGUUAAGUGGGCGUCGGAUGUGCAUUGUUUUAC |