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BaseInfo

ncRNA ID	novel_zma_miR5692
Species	Zea mays
Class	miRNA
Genome position	Chr3:154341164-154341236 [+]
Reference genome	RefGen_v4
Source	SRR2638137;SRR2647385
Length	22
Mature sequence(if miRNA)	1 - CUGGUGUCGUGCGAAGGGCUCC - 22
Stem-loop(if miRNA)	--- U       U  GA      -------   - GAC   G    C GGUGUCG GC  AGGGCU       CCU C   CUG U    | ||||||| ||  ||||||       ||| |   |||    G CCGUAGC CG  UCCCGG       GGA G   GAC C UCG C       -  AC      UGCCGAC   U -AC   C
Stem-loop sequence	CUGGUGUCGUGCGAAGGGCUCCUCGACCUGGUCCCAGCAGUAGGCAGCCGUGGCCCUCAGCCGAUGCCCGGCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020551987.1	ncRNA:22   CCUCGGGAAGCGUGCUGUGGUC   1   ||||||*||||||||||||||| targets:114   GGAGCCAUUCGCACGACACCAG   135 Target Full Sequence	1.0	PREDICTED: Zea mays serine/threonine-protein phosphatase 7 long form homolog (LOC109945675), mRNA	NA	coding protein	psRNATarget
XM_020542638.1	ncRNA:22   CCUCGGGAAGCGUGCUGUGGUC   1   ||||||*||||||||||||||| targets:114   GGAGCCAUUCGCACGACACCAG   135 Target Full Sequence	1.0	PREDICTED: Zea mays serine/threonine-protein phosphatase 7 long form homolog (LOC103655190), mRNA	NA	coding protein	psRNATarget
XM_020539934.1	ncRNA:22   CCUCGGGAAGCGUGCUGUGGUC   1   ||||||*||||||||||||||| targets:114   GGAGCCAUUCGCACGACACCAG   135 Target Full Sequence	1.0	PREDICTED: Zea mays serine/threonine-protein phosphatase 7 long form homolog (LOC109940407), mRNA	NA	coding protein	psRNATarget
XM_020552241.1	ncRNA:22   CCUCGGGAAGCGUGCUGUGGUC   1   ||||||*||||||||||||||| targets:942   GGAGCCAUUCGCACGACACCAG   963 Target Full Sequence	1.0	PREDICTED: Zea mays protein MAIN-LIKE 1 (LOC103655717), mRNA	NA	coding protein	psRNATarget
XM_020544772.1	ncRNA:22   CCUCGGGAAGCGUGCUGUGGUC   1   ||||||*||||||||||||||| targets:472   GGAGCCAUUCGCACGACACCAG   493 Target Full Sequence	1.0	PREDICTED: Zea mays serine/threonine-protein phosphatase 7 long form homolog (LOC109942648), mRNA	NA	coding protein	psRNATarget
XM_020542927.1	ncRNA:22   CCUCGGGAAGCGUGCUGUGGUC   1   *|||||*||||||||||||||| targets:114   CGAGCCAUUCGCACGACACCAG   135 Target Full Sequence	1.0	PREDICTED: Zea mays serine/threonine-protein phosphatase 7 long form homolog (LOC109941717), mRNA	NA	coding protein	psRNATarget