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BaseInfo

ncRNA ID	osa-miRf10166-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - CUGCUAGAAGCUCCCCCAAAUAG - NA
Stem-loop(if miRNA)	AG         U            A   G ---    C GCUG  CUGUUUGGG GAGCUUCUAGCA CUG A   UAUU U ||||  ||||||||| |||||||||||| ||| |   |||| CGAC  GAUAAACCC CUCGAAGAUCGU GAC U   AUAG U     CA         C            C   G CGA    G
Stem-loop sequence	GCUGAGCUGUUUGGGUGAGCUUCUAGCAACUGGAUAUUCUUGGAUAAGCUGCAGCUGCUAGAAGCUCCCCCAAAUAGACCAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK120042.1	ncRNA:23   GAUAAACCCCCUCGAAGAUCGUC   1   ||=|||||||*|||||||||||| targets:440   CUGUUUGGGGCAGCUUCUAGCAG   462 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-188-E11, full insert sequence	NA	coding protein	psRNATarget
AK063336.1	ncRNA:23   GAUAAACCCCCUCGAAGAUCGUC   1   ||=|||||||*|||||||||||| targets:1675   CUGUUUGGGGCAGCUUCUAGCAG   1697 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:001-114-A07, full insert sequence	NA	coding protein	psRNATarget
AK288425.1	ncRNA:23   GAUAAACCCCCUCGAAGAUCGUC   1   ||=|||||||*|||||||||||| targets:1245   CUGUUUGGGGCAGCUUCUAGCAG   1267 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090032K06, full insert sequence	NA	coding protein	psRNATarget
XM_015783080.1	ncRNA:23   GAUAAACCCCCUCGAAGAUCGUC   1   ||=|||||||*|||||||||||| targets:2292   CUGUUUGGGGCAGCUUCUAGCAG   2314 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group protein ZINC INDUCED FACILITATOR 1 (LOC4338249), mRNA	protein ZINC INDUCED FACILITATOR 1(LOC4338249)	coding protein	psRNATarget
XM_015795518.1	ncRNA:23   GAUAAACCCCCUCGAAGAUCGUC   1   ||=*|||*||*|||||||||||| targets:17   CUGCUUGAGGCAGCUUCUAGCAG   39 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group formamidopyrimidine-DNA glycosylase (LOC4345225), transcript variant X2, mRNA	formamidopyrimidine-DNA glycosylase(LOC4345225)	coding protein	psRNATarget
XM_015795516.1	ncRNA:23   GAUAAACCCCCUCGAAGAUCGUC   1   ||=*|||*||*|||||||||||| targets:8   CUGCUUGAGGCAGCUUCUAGCAG   30 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group formamidopyrimidine-DNA glycosylase (LOC4345225), transcript variant X1, mRNA	formamidopyrimidine-DNA glycosylase(LOC4345225)	coding protein	psRNATarget