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BaseInfo

ncRNA ID novel_zma_miR5679
Species Zea mays
Class miRNA
Genome position Chr3:173004343-173004393 [-]
Reference genome RefGen_v4
Source SRR2638137
Length 24
Mature sequence(if miRNA) 1 - GACUAGGAUGAGAUUUAAACCCCU - 24
Stem-loop(if miRNA) --           C  -        A
  GGGUUUAAAUC UC UCCUAGUU A
  ||||||||||| || |||||||| A
  CCCAAAUUUAG AG AGGAUCAG A
UC           -  U        U
Stem-loop sequence GGGUUUAAAUCCUCUCCUAGUUAAAAUGACUAGGAUGAGAUUUAAACCCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT069231.2
ncRNA:24   UCCCCAAAUUUAGAGUAGGAUCAG   1
  |||*|*|||||||||*||||||||
targets:1009   AGGAGAUUAAAUCUCUUCCUAGUC   1032

2.5 Zea mays full-length cDNA clone ZM_BFb0366D18 mRNA, complete cds NA coding protein psRNATarget