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BaseInfo

ncRNA ID novel_zma_miR5669
Species Zea mays
Class miRNA
Genome position Chr10:60898042-60898106 [+]
Reference genome RefGen_v4
Source SRR2638137;SRR2647386
Length 24
Mature sequence(if miRNA) 42 - ACCGUCUGCGCCUGUGUAGAGAGC - 65
Stem-loop(if miRNA) --G        C   U       -CG  -C    
   CUCUACGC AGG CGCAGAC   UC  GGCCU
   |||||||| ||| |||||||   ||  ||||C
   GAGAUGUG UCC GCGUCUG   AG  CCGGU
CGA        -   -       CCA  CA    
Stem-loop sequence GCUCUACGCCAGGUCGCAGACCGUCCGGCCUCUGGCCACGAACCGUCUGCGCCUGUGUAGAGAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008666547.2
ncRNA:24   CGAGAGAUGUGUCCGCGUCUGCCA   1
  **||*|*|==||||||||||||||
targets:282   AGUCACGAUGCAGGCGCAGACGGU   305

3.0 PREDICTED: Zea mays vesicle-associated protein 1-2 (LOC103643384), mRNA NA coding protein psRNATarget