| ncRNA ID | novel_zma_miR5665 |
| Species | Zea mays |
| Class | miRNA |
| Genome position | Chr3:190102384-190102552 [+] |
| Reference genome | RefGen_v4 |
| Source | SRR2638137;SRR2647385;SRR2647387;SRR2647389;SRR2647390;SRR1743455 |
| Length | 24 |
| Mature sequence(if miRNA) | 146 - GGUUUCCACCCAGUUAUGGAUUGG - 169 |
| Stem-loop(if miRNA) |
-- C C A A A G UUGAA U AAUCCAUAACUGGGUGGAAACCCAUAGAAAA CCG GG UUCAG UU UUAAG CAGCAGCAUACACAGUGAUA GC A ||||||||||||||||||||||||||||||| ||| || ||||| || ||||| |||||||||||||||||||| || C UUAGGUAUUGACCCACCUUUGGGUAUCUUUU GGU CC AAGUC AA AAUUC GUCGUUGUAUGUGUUACUGU UG C GG A C C G C A UUAAA U |
| Stem-loop sequence | AAUCCAUAACUGGGUGGAAACCCAUAGAAAACCCGCGGAUUCAGAUUAUUAAGGCAGCAGCAUACACAGUGAUAUUGAAGCUACCUGUAAAUUUGUCAUUGUGUAUGUUGCUGACUUAACAAGCUGAACCCCUGGAUUUUCUAUGGGUUUCCACCCAGUUAUGGAUUGG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_008675165.2 |
|
0.0 | PREDICTED: Zea mays Calmodulin-7 (LOC100502442), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
| EU961754.1 |
|
2.5 | Zea mays clone 238086 thiosulfate transferase mRNA, complete cds | NA | coding protein | psRNATarget |