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BaseInfo

ncRNA ID	novel_zma_miR5663
Species	Zea mays
Class	miRNA
Genome position	Chr3:16407255-16407306 [+]
Reference genome	RefGen_v4
Source	SRR2638137;SRR2647386;SRR2647389;SRR2647467
Length	24
Mature sequence(if miRNA)	29 - GACUAGGAGGGGAUUUAAACUCCU - 52
Stem-loop(if miRNA)	--   A                   A   GAG UUAAAUCCCCUCCUAGUCA A   ||| |||||||||||||||||||   CUC AAUUUAGGGGAGGAUCAGU A UC   A                   A
Stem-loop sequence	GAGAUUAAAUCCCCUCCUAGUCAAAAAUGACUAGGAGGGGAUUUAAACUCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ095217.1	ncRNA:24   UCCUCAAAUUUAGGGGAGGAUCAG   1   |||=||||||||||||*||||||| targets:73   AGGGGUUUAAAUCCCCGCCUAGUC   96 Target Full Sequence	1.5	TSA: Zea mays contig30870, mRNA sequence	NA	coding protein	psRNATarget
XM_008670947.1	ncRNA:24   UCCUCAAAUUUAGGGGAGGAUCAG   1   |||=|*|||||||||=|||||||| targets:604   AGGGGAUUAAAUCCCUUCCUAGUC   627 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103646219 (LOC103646219), mRNA	NA	coding protein	psRNATarget
EU953211.1	ncRNA:24   UCCUCAAAUUUAGGGGAGGAUCAG   1   ||*=|||||||||||||=|||||= targets:1757   AGAGGUUUAAAUCCCCUUCUAGUU   1780 Target Full Sequence	2.5	Zea mays clone 1390646 mRNA sequence	NA	coding protein	psRNATarget
NM_001319738.1	ncRNA:24   UCCUCAAAUUUAGGGGAGGAUCAG   1   ||*=|||||||||||||=|||||= targets:1783   AGAGGUUUAAAUCCCCUUCUAGUU   1806 Target Full Sequence	2.5	Zea mays cytochrome P450 81D11-like (LOC103640488), mRNA	NA	coding protein	psRNATarget
EU957986.1	ncRNA:24   UCCUCAAAUUUAGGGGAGGAUCAG   1   ||*=|||||||||||||=|||||= targets:1784   AGAGGUUUAAAUCCCCUUCUAGUU   1807 Target Full Sequence	2.5	Zea mays clone 1639355 cytochrome P450 CYP81N5 mRNA, complete cds	NA	coding protein	psRNATarget