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BaseInfo

ncRNA ID	novel_zma_miR5658
Species	Zea mays
Class	miRNA
Genome position	Chr2:109314250-109314311 [+]
Reference genome	RefGen_v4
Source	SRR2638137;SRR2647221;SRR2647385;SRR2647386;SRR2647388;SRR2647389;SRR2647391;SRR2647467
Length	24
Mature sequence(if miRNA)	1 - GUUCGCUCUUCACUGGUUCGGUGA - 24
Stem-loop(if miRNA)	--     C           U    GAC     G   GUUCG UCUUCACUGGU CGGU   GCUGG G   ||||| ||||||||||| ||||   |||||   CAGGU AGGAGUGACCG GUUA   CGGCU A GU     -           -    --A     C
Stem-loop sequence	GUUCGCUCUUCACUGGUUCGGUGACGCUGGGGACUCGGCAAUUGGCCAGUGAGGAUGGACUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ054133.1	ncRNA:24   AG-UGGCUUGGUCACUUCUCGCUUG   1   ||-=|=|||||*|||||||*||||| targets:136   UCUGCUGAACCUGUGAAGAACGAAC   160 Target Full Sequence	2.5	TSA: Zea mays contig55255, mRNA sequence	NA	coding protein	psRNATarget
EU964405.1	ncRNA:24   AG-UGGCUUGGUCACUUCUCGCUUG   1   ||-=|=|||||*|||||||*||||| targets:554   UCUGCUGAACCUGUGAAGAACGAAC   578 Target Full Sequence	2.5	Zea mays clone 278645 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU973679.1	ncRNA:24   AG-UGGCUUGGUCACUUCUCGCUUG   1   ||-=|=|||||*|||||||*||||| targets:601   UCUGCUGAACCUGUGAAGAACGAAC   625 Target Full Sequence	2.5	Zea mays clone 404386 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001196884.1	ncRNA:24   AG-UGGCUUGGUCACUUCUCGCUUG   1   ||-=|=|||||*|||||||*||||| targets:573   UCUGCUGAACCUGUGAAGAACGAAC   597 Target Full Sequence	2.5	Zea mays hypothetical protein (LOC100278464), mRNA	NA	coding protein	psRNATarget
BT088025.1	ncRNA:24   AG-UGGCUUGGUCACUUCUCGCUUG   1   ||-=|=|||||*|||||||*||||| targets:573   UCUGCUGAACCUGUGAAGAACGAAC   597 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0366F23 mRNA, complete cds	NA	coding protein	psRNATarget