| ncRNA ID | novel_zma_miR5657 |
| Species | Zea mays |
| Class | miRNA |
| Genome position | Chr2:70451549-70451759 [+] |
| Reference genome | RefGen_v4 |
| Source | SRR2638137;SRR2647390;SRR2647467 |
| Length | 22 |
| Mature sequence(if miRNA) | 1 - UUGAUUUCACAACCUCUUGAUG - 22 |
| Stem-loop(if miRNA) |
-- A C U AA A G G A C C UUCAAUU UUGAUUUCACA CCU UUGA GCAAU CUC CCAAGUU GUAAGGU UUGGAGGCUUAUACCCUGAAU AAAUUGUGUUG GGCCUCA UUGCGG G ||||||||||| ||| |||| ||||| ||| ||||||| ||||||| ||||||||||||||||||||| ||||||||||| ||||||| |||||| U AACUAAAGUGU GGA AACU CGUUA GAG GGUUCAA CAUUCCA AACCUCCGAAUAUGGGACUUG UUUAACACAAC CUGGAGU AACGUC G AC C A U CC C G A G A U CCAUAUU |
| Stem-loop sequence | UUGAUUUCACAACCUCUUGAUGCAAUAACUCACCAAGUUGGUAAGGUGUUGGAGGCUUAUACCCUGAAUAAAAUUGUGUUGCGGCCUCACUUGCGGUUCAAUUGUGUUAUACCCUGCAAUUGAGGUCACAACACAAUUUGGUUCAGGGUAUAAGCCUCCAAAACCUUACGAACUUGGCGAGCCAUUGCUUCAAAAGGCUGUGAAAUCAACA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_020553167.1 |
|
2.5 | PREDICTED: Zea mays uncharacterized LOC100273763 (pco133309c), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
| XM_008683256.2 |
|
2.5 | PREDICTED: Zea mays uncharacterized LOC100273763 (pco133309c), transcript variant X1, mRNA | NA | coding protein | psRNATarget |