ncRNA ID | novel_zma_miR5653 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:223794343-223794432 [+] |
Reference genome | RefGen_v4 |
Source | SRR1618883 |
Length | 24 |
Mature sequence(if miRNA) | 67 - AACACUCGGUAAAGAAUUUGGCAC - 90 |
Stem-loop(if miRNA) |
--   ---      U      G       G  U              A   GUU   UUCUUU ACUGAG GUUUUUU UG GGCACUCGGCAAAG G   |||   |||||| |||||| ||||||| || ||||||||||||||   CGG   AAGAAA UGGCUC CAAAAAA GC CCGUGAGCUGUUUC C CA   UUU      -      A       -  -              U |
Stem-loop sequence | GUUUUCUUUUACUGAGGGUUUUUUGUGUGGCACUCGGCAAAGAGCUCUUUGUCGAGUGCCCGAAAAAACACUCGGUAAAGAAUUUGGCAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008671632.2 |
|
1.0 | PREDICTED: Zea mays E3 ubiquitin-protein ligase RNF181 homolog (LOC103647067), mRNA | NA | coding protein | psRNATarget |