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BaseInfo

ncRNA ID	novel_zma_miR5651
Species	Zea mays
Class	miRNA
Genome position	Chr2:12880805-12880874 [-]
Reference genome	RefGen_v4
Source	SRR2638137;SRR2647343;SRR2647385;SRR2647386;SRR2647387;SRR2647388;SRR2647391
Length	22
Mature sequence(if miRNA)	49 - GUCAUCUCUUCUCUUUGGGCGG - 70
Stem-loop(if miRNA)	--  -    U  UC        C  -GC   UACAU   GU CAUC CU  UCUUUGGG GG   UUA     A   || |||| ||  |||||||| ||   |||     C   CA GUAG GA  AGAAACCC CU   AAU     C CA  C    -  UC        U  AAC   UACAU
Stem-loop sequence	GUCAUCUCUUCUCUUUGGGCGGGCUUAUACAUACCUACAUUAACAAUCUCCCAAAGACUAGGAUGCACAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU967183.1	ncRNA:22   GG-CGGGUUUCUCUUCUCUACUG   1   ||-||||||=||||||||||||| targets:216   CCAGCCCAAGGAGAAGAGAUGAC   238 Target Full Sequence	1.0	Zea mays clone 300073 mRNA sequence	NA	coding protein	psRNATarget
EU964890.1	ncRNA:22   GG-CGGGUUUCUCUUCUCUACUG   1   ||-||||||=||||||||||||| targets:244   CCAGCCCAAGGAGAAGAGAUGAC   266 Target Full Sequence	1.0	Zea mays clone 282386 somatic embryogenesis related protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001156382.1	ncRNA:22   GG-CGGGUUUCUCUUCUCUACUG   1   ||-||||||=||||||||||||| targets:244   CCAGCCCAAGGAGAAGAGAUGAC   266 Target Full Sequence	1.0	Zea mays somatic embryogenesis related protein (LOC100283482), mRNA	NA	coding protein	psRNATarget
BT055411.1	ncRNA:22   GGCGGGUUUCUCUUCUCUACUG   1   =*||||||=||||||||||||| targets:223   UAGCCCAAGGAGAAGAGAUGAC   244 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0151B14 mRNA, complete cds	NA	coding protein	psRNATarget
EZ051338.1	ncRNA:22   GGCGGGUUUCUCUUCUCUACUG   1   |**||||||||||*|||||||= targets:110   CAUCCCAAAGAGAUGAGAUGAU   131 Target Full Sequence	2.5	TSA: Zea mays contig52458, mRNA sequence	NA	coding protein	psRNATarget
EU965343.1	ncRNA:22   GGCGGGUUUCUCUUCUCUACUG   1   |**||||||||||*|||||||= targets:1302   CAUCCCAAAGAGAUGAGAUGAU   1323 Target Full Sequence	2.5	Zea mays clone 285434 myb-like DNA-binding domain, SHAQKYF class family protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001156529.1	ncRNA:22   GGCGGGUUUCUCUUCUCUACUG   1   |**||||||||||*|||||||= targets:1302   CAUCCCAAAGAGAUGAGAUGAU   1323 Target Full Sequence	2.5	Zea mays myb-like DNA-binding domain, SHAQKYF class family protein (LOC100283628), mRNA	NA	coding protein	psRNATarget
BT016414.1	ncRNA:22   GGCGGGUUUCUCUUCUCUACUG   1   |**||||||||||*|||||||= targets:1288   CAUCCCAAAGAGAUGAGAUGAU   1309 Target Full Sequence	2.5	Zea mays clone Contig247 mRNA sequence	NA	coding protein	psRNATarget