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BaseInfo

ncRNA ID	osa-miRf10162-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - CACAUGUCAGUGACCACGUC - NA
Stem-loop(if miRNA)	U   GAG   C                 AU   CACC  UCA   GGC GUGGUCACUGACAUGUG  CCC    A  |||   ||| |||||||||||||||||  |||  GGU   CUG CACCAGUGACUGUACAC  GGG    C G   GGA   -                 CU   CAUC
Stem-loop sequence	UUCAGAGGGCCGUGGUCACUGACAUGUGAUCCCCACCACCUACGGGUCCACAUGUCAGUGACCACGUCAGGUGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015783407.1	ncRNA:20   CUGCACCAGUGACUGUACAC   1   |||*|||||||||||||||| targets:1531   GACAUGGUCACUGACAUGUG   1550 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group probable purine permease 4 (LOC4339571), mRNA	probable purine permease 4(LOC4339571)	coding protein	psRNATarget
AK121464.1	ncRNA:20   CUGCACCAGUGACUGUACAC   1   ||||||||*||||||||||| targets:2071   GACGUGGUGACUGACAUGUG   2090 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023145F10, full insert sequence	NA	coding protein	psRNATarget
XM_015766541.1	ncRNA:20   CUGCACCAGUGACUGUACAC   1   ||||||||*||||||||||| targets:2161   GACGUGGUGACUGACAUGUG   2180 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group multicopper oxidase LPR1 (LOC4326011), transcript variant X1, mRNA	multicopper oxidase LPR1(LOC4326011)	coding protein	psRNATarget
XM_015789739.1	ncRNA:20   CUGCACCAGUGACUGUACAC   1   |==|*||||||||||||||| targets:49   GGUGGGGUCACUGACAUGUG   68 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group multifunctional methyltransferase subunit TRM112-like protein At1g22270 (LOC4343952), mRNA	multifunctional methyltransferase subunit TRM112-like protein At1g22270(LOC4343952)	coding protein	psRNATarget
AK242750.1	ncRNA:20   CUGCACCAGUGACUGUACAC   1   *|=|||*||||||||||||| targets:1312   CAUGUGCUCACUGACAUGUG   1331 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090050H19, full insert sequence	NA	coding protein	psRNATarget
XM_015791743.1	ncRNA:20   CUGCACCAGUGACUGUACAC   1   *|=|||||*||||||||||| targets:1531   UAUGUGGUGACUGACAUGUG   1550 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4342287 (LOC4342287), mRNA	uncharacterized LOC4342287(LOC4342287)	coding protein	psRNATarget
AK064136.1	ncRNA:20   CUGCACCAGUGACUGUACAC   1   *|=|||||*||||||||||| targets:1603   UAUGUGGUGACUGACAUGUG   1622 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-102-G06, full insert sequence	NA	coding protein	psRNATarget
AK121893.1	ncRNA:20   CUGCACCAGUGACUGUACAC   1   |||||*||||||||||*||| targets:1319   GACGUAGUCACUGACAGGUG   1338 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033105C18, full insert sequence	NA	coding protein	psRNATarget
AK103210.1	ncRNA:20   CUGCACCAGUGACUGUACAC   1   |||*|*|||||||||||||| targets:1234   GACUUUGUCACUGACAUGUG   1253 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J033122L17, full insert sequence	NA	coding protein	psRNATarget