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BaseInfo

ncRNA ID	novel_zma_miR5641
Species	Zea mays
Class	miRNA
Genome position	Chr2:107034615-107034672 [-]
Reference genome	RefGen_v4
Source	SRR2638137
Length	24
Mature sequence(if miRNA)	35 - ACCGUCCGCCCUUGUGCAGAGAGC - 58
Stem-loop(if miRNA)	--  C      --   U    A   -A  AC   AC GUCCGC  CCU GUGC GAG  GC  C   || ||||||  ||| |||| |||  ||   UG CAGGCG  GGA CACG CUC  CG  G CC  C      CU   C    -   CG  CC
Stem-loop sequence	ACCGUCCGCCCUUGUGCAGAGAGCACCGCCGCGCCUCGCACCAGGUCGCGGACCGUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU970066.1	ncRNA:24   CGAGAGACGUGUUCCCGCCUGCCA   1   ||*|||||||||=||||||||||| targets:821   GCCCUCUGCACAGGGGCGGACGGU   844 Target Full Sequence	1.5	Zea mays clone 339328 mRNA sequence	NA	coding protein	psRNATarget
EU970066.1	ncRNA:24   CGAGAGACGUGUUCCCGCCUGCCA   1   *||||||||=|||||||||||*|| targets:893   ACUCUCUGCGCAAGGGCGGACUGU   916 Target Full Sequence	2.5	Zea mays clone 339328 mRNA sequence	NA	coding protein	psRNATarget
Y15069.1	ncRNA:24   CGA---GAGACGUGUUCCCGCCUGCCA   1   |||---|||*|*=|||||||||||||| targets:155   GCUGUCCUCCGGGCAAGGGCGGACGGU   181 Target Full Sequence	3.0	Zea mays mRNA for cinnamoyl-CoA reductase	NA	coding protein	psRNATarget
NM_001112245.2	ncRNA:24   CGA---GAGACGUGUUCCCGCCUGCCA   1   |||---|||*|*=|||||||||||||| targets:165   GCUGUCCUCCGGGCAAGGGCGGACGGU   191 Target Full Sequence	3.0	Zea mays cinnamoyl CoA reductase 2 (cncr2), mRNA	NA	coding protein	psRNATarget