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BaseInfo

ncRNA ID	novel_zma_miR5610
Species	Zea mays
Class	miRNA
Genome position	Chr1:8981662-8981743 [-]
Reference genome	RefGen_v4
Source	SRR2638137;SRR2647221;SRR2647343
Length	24
Mature sequence(if miRNA)	59 - GUUCCUUGUGUGCCACUGGCCUCA - 82
Stem-loop(if miRNA)	--                   CCUCA     CAUAAACACC   GUUCCUUGUGUGCCACUGG     CAUAU          A   |||||||||||||||||||     |||||          A   UAAGGAACACACGGUGACU     GUAUA          A AG                   -CACC     UCCAUAUACA
Stem-loop sequence	GUUCCUUGUGUGCCACUGGCCUCACAUAUCAUAAACACCAAAACAUAUACCUAUAUGCCACUCAGUGGCACACAAGGAAUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU975854.1	ncRNA:24   ACUCCGGUCACCGUGUGUUCCUUG   1   ||=||||||||||||||||||=|= targets:709   UGGGGCCAGUGGCACACAAGGGAU   732 Target Full Sequence	2.5	Zea mays clone 503152 chaperone protein dnaJ mRNA, complete cds	NA	coding protein	psRNATarget
BT085283.1	ncRNA:24   ACUCCGGUCACCGUGUGUUCCUUG   1   ||=||||||||||||||||||=|= targets:962   UGGGGCCAGUGGCACACAAGGGAU   985 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0360M07 mRNA, complete cds	NA	coding protein	psRNATarget
EU956996.1	ncRNA:24   ACUCCGGUCACCGUGUGUUCCUUG   1   ||=|||||||||||=||||||||= targets:1624   UGGGGCCAGUGGCAUACAAGGAAU   1647 Target Full Sequence	2.5	Zea mays clone 1579828 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU967272.1	ncRNA:24   ACUCCGGUCACCGUGUGUUCCUUG   1   *****|||||||||=||||||||= targets:629   AUUUUCCAGUGGCAUACAAGGAAU   652 Target Full Sequence	2.5	Zea mays clone 300934 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget