| ncRNA ID | novel_zma_miR5601 |
| Species | Zea mays |
| Class | miRNA |
| Genome position | Chr5:193736016-193736116 [+] |
| Reference genome | RefGen_v4 |
| Source | SRR1618883;SRR5105961 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AUGAGAUGGACUGACCUAUGGGGG - 24 |
| Stem-loop(if miRNA) |
-- AU A --A GGG - ---- -AG G AUGAG GG CUG CCUAUGGG C AGAUC CUCGUGU GGACU G ||||| || ||| |||||||| | ||||| ||||||| ||||| G UACUC CC GGC GGAUAUCC G UCUAG GAGUACG CUUGG A CG -- G AGG --A A AAAU AAA G |
| Stem-loop sequence | AUGAGAUGGACUGACCUAUGGGGGGCAGAUCCUCGUGUAGGGACUGGGAGGGUUCAAAGCAUGAGUAAAGAUCUAGACCUAUAGGGGACGGGCCCUCAUGC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_020549459.1 |
|
0.0 | PREDICTED: Zea mays uncharacterized LOC100192909 (pco096800), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
| XM_020539261.1 |
|
2.5 | PREDICTED: Zea mays uncharacterized LOC103629447 (LOC103629447), mRNA | NA | coding protein | psRNATarget |