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BaseInfo

ncRNA ID	novel_zma_miR5590
Species	Zea mays
Class	miRNA
Genome position	Chr1:33756657-33756758 [+]
Reference genome	RefGen_v4
Source	SRR2638137;SRR2647388;SRR2647391
Length	24
Mature sequence(if miRNA)	79 - GAUCUAUCCUCCUUUUUGUGAGGG - 102
Stem-loop(if miRNA)	-                     C           GUC   -CAG     GU  CCUCACAAAAAGGAGGAUAGA CCCACCUGCAG   CAG    AUAAU  U  ||||||||||||||||||||| |||||||||||   |||    |||||  GGAGUGUUUUUCCUCCUAUCU GGGUGGGCGUC   GUU    UGUUG  U G                     A           AUU   AUUA     AU
Stem-loop sequence	CCUCACAAAAAGGAGGAUAGACCCCACCUGCAGGUCCAGCAGAUAAUGUUUUAGUUGUAUUAUUGUUACUGCGGGUGGGAUCUAUCCUCCUUUUUGUGAGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
X55314.1	ncRNA:24   GGGAGUGUUUUUCCUCCUAUCUAG   1   ||||||||||||||||||||||*| targets:924   CCCUCACAAAAAGGAGGAUAGACC   947 Target Full Sequence	1.5	Zea mays A2 gene	NA	coding protein	psRNATarget
JB166522.1	ncRNA:20   GUGUUUUUCCUCCUAUCUAG   1   ||||||||||||||||||*| targets:1   CACAAAAAGGAGGAUAGACC   20 Target Full Sequence	1.5	Sequence 4186 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238191.1	ncRNA:20   GUGUUUUUCCUCCUAUCUAG   1   ||||||||||||||||||*| targets:1   CACAAAAAGGAGGAUAGACC   20 Target Full Sequence	1.5	Sequence 4186 from Patent EP2985353	NA	coding protein	psRNATarget
HI406061.1	ncRNA:20   GUGUUUUUCCUCCUAUCUAG   1   ||||||||||||||||||*| targets:1   CACAAAAAGGAGGAUAGACC   20 Target Full Sequence	1.5	Sequence 4186 from Patent EP2074227	NA	coding protein	psRNATarget