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BaseInfo

ncRNA ID novel_zma_miR5589
Species Zea mays
Class miRNA
Genome position Chr1:256926454-256926504 [-]
Reference genome RefGen_v4
Source SRR2638137;SRR2647385;SRR2647387;SRR2647388;SRR2647391;SRR2647467;SRR1583943
Length 24
Mature sequence(if miRNA) 1 - AUCGGUCUAUUCGGGUUUUCGGGU - 24
Stem-loop(if miRNA) --    --               AUC
  CCGA  ACUCGAAUAGACCGA   G
  ||||  |||||||||||||||   A
  GGCU  UGGGCUUAUCUGGCU   A
UG    UU               AUU
Stem-loop sequence CCGAACUCGAAUAGACCGAAUCGAAUUAUCGGUCUAUUCGGGUUUUCGGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008650156.2
ncRNA:24   UGGGCUUUUGGGCUUAUCUGGCUA   1
  *|*=|||=|*|||||||||||||*
targets:559   UCGUGAAGAACCGAAUAGACCGAA   582

3.0 PREDICTED: Zea mays GDSL esterase/lipase At1g71691-like (LOC103628962), mRNA NA coding protein psRNATarget