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BaseInfo

ncRNA ID novel_zma_miR5585
Species Zea mays
Class miRNA
Genome position Chr1:285473444-285473493 [-]
Reference genome RefGen_v4
Source SRR2638137;SRR2647221
Length 24
Mature sequence(if miRNA) 1 - AUCUCCGACGGUUUUAGCCUUAUG - 24
Stem-loop(if miRNA) --      -            C  U
  UAAGGU AAAGCCGUCGGA AU A
  |||||| |||||||||||| || U
  AUUCCG UUUUGGCAGCCU UA C
GU      A            C  U
Stem-loop sequence UAAGGUAAAGCCGUCGGACAUUAUCUAUCUCCGACGGUUUUAGCCUUAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT084287.2
ncRNA:24   GUAUUCCGAUUUUGGCAGCCUCUA   1
  |||||||*|*=|||||||||||||
targets:630   CAUAAGGAUUGAACCGUCGGAGAU   653

3.0 Zea mays full-length cDNA clone ZM_BFb0098I11 mRNA, complete cds NA coding protein psRNATarget