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BaseInfo

ncRNA ID	novel_zma_miR5583
Species	Zea mays
Class	miRNA
Genome position	Chr5:184655045-184655120 [+]
Reference genome	RefGen_v4
Source	SRR1618883
Length	23
Mature sequence(if miRNA)	54 - AUUUCUCUCCCAUGGAUCCCCUU - 76
Stem-loop(if miRNA)	--          A           CC     U     A   GGGGAUCCAU GGGGAGGAAUU  UUUGU AUUCA A   |||||||||| |||||||||||  ||||| |||||   CCCCUAGGUA CCUCUCUUUAG  AAACG UAAGU A UU          C           AA     U     U
Stem-loop sequence	GGGGAUCCAUAGGGGAGGAAUUCCUUUGUUAUUCAAAAUUGAAUUGCAAAAAGAUUUCUCUCCCAUGGAUCCCCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001175907.1	ncRNA:23   UUCCCCUAGGUACCCUCUCUUUA   1   =|||||||||||||||||*|||| targets:1258   GAGGGGAUCCAUGGGAGAAAAAU   1280 Target Full Sequence	1.5	Zea mays CCAAT-HAP2 transcription factor (CA2P12), mRNA	NA	coding protein	psRNATarget
BT066676.1	ncRNA:23   UUCCCCUAGGUACCCUCUCUUUA   1   =|||||||||||||||||*|||| targets:1258   GAGGGGAUCCAUGGGAGAAAAAU   1280 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0044C22 mRNA, complete cds	NA	coding protein	psRNATarget
LQ241944.1	ncRNA:20   CCCUAGGUACCCUCUCUUUA   1   *|||||||||||=||||||| targets:1   AGGAUCCAUGGGGGAGAAAU   20 Target Full Sequence	1.5	Sequence 7939 from Patent EP2985353	NA	coding protein	psRNATarget
HI409814.1	ncRNA:20   CCCUAGGUACCCUCUCUUUA   1   *|||||||||||=||||||| targets:1   AGGAUCCAUGGGGGAGAAAU   20 Target Full Sequence	1.5	Sequence 7939 from Patent EP2074227	NA	coding protein	psRNATarget
JB170275.1	ncRNA:20   CCCUAGGUACCCUCUCUUUA   1   *|||||||||||=||||||| targets:1   AGGAUCCAUGGGGGAGAAAU   20 Target Full Sequence	1.5	Sequence 7939 from Patent EP2559767	NA	coding protein	psRNATarget