ncRNA ID | novel_zma_miR5582 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:300991440-300991535 [-] |
Reference genome | RefGen_v4 |
Source | SRR2638137 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UGUUAACUCCGUAGCAACGCACGG - 24 |
Stem-loop(if miRNA) |
--                                 ----------G      U   GUGCGUUGCUACGGAGUUAACAUAUAAUGAUAA           AUAUAU G   |||||||||||||||||||||||||||||||||           ||||||   CACGCAACGAUGCCUCAAUUGUAUAUUGCUAUU           UAUGUA A GG                                 AAUUACAAAGA      G |
Stem-loop sequence | GUGCGUUGCUACGGAGUUAACAUAUAAUGAUAAGAUAUAUUGAGAUGUAUAGAAACAUUAAUUAUCGUUAUAUGUUAACUCCGUAGCAACGCACGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ106575.1 |
|
1.5 | TSA: Zea mays contig42233, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EU940751.1 |
|
1.5 | Zea mays clone 1061917 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EU947159.1 |
|
2.5 | Zea mays clone 330083 mRNA sequence | NA | coding protein | psRNATarget |