ncRNA ID |
novel_zma_miR5566 |
Species |
Zea mays |
Class |
miRNA |
Genome position |
Chr5:178317697-178317832 [+] |
Reference genome |
RefGen_v4 |
Source |
SRR1618883;SRR4237222;SRR4237224
|
Length |
24 |
Mature sequence(if miRNA) |
113 - UUGGGGUAGAACCGAACAUGGCCU - 136 |
Stem-loop(if miRNA) |
--   -         -AU UU              C GA         UAC  A UAGAGGAGAUUUUGA
  GCU UGUUCGGUU   U  CAAUCCAUAUGGAU G  GGGGAUUGA   AG U               C
  ||| |||||||||   |  |||||||||||||| |  |||||||||   || |               U
  CGG ACAAGCCAA   G  GUUAGGUAUACCUA C  CCCCUAACU   CC C               U
UC   U         GAU GG              A UC         --C  - CAAAAUUAGGGAUCA
|
Stem-loop sequence |
GCUUGUUCGGUUAUUUUCAAUCCAUAUGGAUCGGAGGGGAUUGAUACAGAUUAGAGGAGAUUUUGACUUACUAGGGAUUAAAACCCCCUCAAUCCCCCUCAAUCCAUAUGGAUUGGGGUAGAACCGAACAUGGCCU
|