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BaseInfo

ncRNA ID novel_zma_miR5542
Species Zea mays
Class miRNA
Genome position Chr8:79919744-79919813 [-]
Reference genome RefGen_v4
Source SRR2638137
Length 24
Mature sequence(if miRNA) 1 - UGGCGUCUUCUGCUUGGAUUCGGA - 24
Stem-loop(if miRNA) --   --A    UG U        --C   --A  GAC
  CGA   CAGG  G AGAUGCUA   AGU   GC   U
  |||   ||||  | ||||||||   |||   ||
  GCU   GUUC  C UCUGCGGU   UCA   CG   U
AG   UAG    GU U        UUU   CGG  GGU
Stem-loop sequence CGAACAGGUGGUAGAUGCUACAGUAGCGACUUUGGGCGGCACUUUUUGGCGUCUUCUGCUUGGAUUCGGA