| ncRNA ID | novel_zma_miR5533 |
| Species | Zea mays |
| Class | miRNA |
| Genome position | Chr8:162638741-162638877 [-] |
| Reference genome | RefGen_v4 |
| Source | SRR2638137;SRR2647385;SRR2647388;SRR2647389;SRR2647467 |
| Length | 24 |
| Mature sequence(if miRNA) | 114 - AAUCUGGUGCAUCCAUUUCGCAUC - 137 |
| Stem-loop(if miRNA) |
-- C C CUAA A ---- C UUCC AAUCUGGUGCAU CAUUU GCAU CAGC GCACCA AUUUUGUGAAG ACCCUUUCCACC U |||||||||||| ||||| |||| |||| |||||| ||||||||||| |||||||||||| UUAGAUCACGUA GUAGA CGUA GUUG CGUGGU UAAAAUGCUUC UGGGGAGGGUGG C AU A A ---A C CGAU U UCCC |
| Stem-loop sequence | AAUCUGGUGCAUCCAUUUCGCAUCUAACAGCAGCACCAAUUUUGUGAAGCACCCUUUCCACCUUCCUCCCCUGGUGGGAGGGGUUCUUCGUAAAAUUAGCUGGUGCCGUUGAAUGCAAGAUGAAUGCACUAGAUUUA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_008645476.2 |
|
1.5 | PREDICTED: Zea mays tic20-like protein (LOC100282929), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
| XM_020551532.1 |
|
1.5 | PREDICTED: Zea mays uncharacterized LOC100282291 (pco125364), transcript variant X1, mRNA | NA | coding protein | psRNATarget |