ncRNA ID | novel_zma_miR5530 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:177494343-177494423 [-] |
Reference genome | RefGen_v4 |
Source | SRR2638137;SRR2647385;SRR2647388;SRR2647389 |
Length | 24 |
Mature sequence(if miRNA) | 58 - AUUAAGUCUAAUUAUUCCAUGAUU - 81 |
Stem-loop(if miRNA) |
--              UUC     UUC   UAU   G  - U   AUUAAGUCUAAUUA   CAUGA   GCA   GUG UG C A   ||||||||||||||   |||||   |||   ||| || |   UAAUUCGGAUUAGU   GUAUU   CGU   UAU AC G C AA              UAA     CAU   --U   G  U A |
Stem-loop sequence | AUUAAGUCUAAUUAUUCCAUGAUUCGCAUAUGUGGUGCUACAGUCAGUAUUUGCUACUUAUGAAUUGAUUAGGCUUAAUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008659551.2 |
|
2.5 | PREDICTED: Zea mays polygalacturonase At1g48100 (LOC103637332), mRNA | NA | coding protein | psRNATarget |