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BaseInfo

ncRNA ID osa-miRf10150-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UCGUUGCCACUUGCCAGUUC - NA
Stem-loop(if miRNA)      C C G              C     -    UUCU  -    GC
GAUGA G A UGGUAAGUGGUAAC AGCGG CAGU    GC GAAU  C
||||| | | |||||||||||||| ||||| ||||    || ||||
CUAUU C U ACCGUUCACCGUUG UUGUC GUCA    UG CUUA  U
     A U G              C     U    ---U  U    AG
Stem-loop sequence GAUGACGCAGUGGUAAGUGGUAACCAGCGGCAGUUUCUGCGAAUGCCUGAAUUCUGUUACUGUCUGUUCGUUGCCACUUGCCAGUUCAUUAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288861.1
ncRNA:20   CUUGACCGUUCACCGUUGCU   1
  *|||||||||||||||||*|
targets:1578   CAACUGGCAAGUGGCAACAA   1597

1.5 Oryza sativa Japonica Group cDNA, clone: J090077F02, full insert sequence NA coding protein psRNATarget
AK101893.1
ncRNA:20   CUUGACCGUUCACCGUUGCU   1
  *|||||*|||||||||||*|
targets:30   AAACUGCCAAGUGGCAACAA   49

2.5 Oryza sativa Japonica Group cDNA clone:J033070O21, full insert sequence NA coding protein psRNATarget
XM_015765916.1
ncRNA:20   CUUGACCGUUCACCGUUGCU   1
  *|||||*|||||||||||*|
targets:28   AAACUGCCAAGUGGCAACAA   47

2.5 PREDICTED: Oryza sativa Japonica Group asparagine--tRNA ligase, cytoplasmic 3 (LOC4325717), mRNA asparagine--tRNA ligase, cytoplasmic 3(LOC4325717) coding protein psRNATarget