ncRNA ID | osa-miRf10150-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - UCGUUGCCACUUGCCAGUUC - NA |
Stem-loop(if miRNA) |
     C C G              C     -    UUCU  -    GC GAUGA G A UGGUAAGUGGUAAC AGCGG CAGU    GC GAAU  C ||||| | | |||||||||||||| ||||| ||||    || |||| CUAUU C U ACCGUUCACCGUUG UUGUC GUCA    UG CUUA  U      A U G              C     U    ---U  U    AG |
Stem-loop sequence | GAUGACGCAGUGGUAAGUGGUAACCAGCGGCAGUUUCUGCGAAUGCCUGAAUUCUGUUACUGUCUGUUCGUUGCCACUUGCCAGUUCAUUAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288861.1 |
|
1.5 | Oryza sativa Japonica Group cDNA, clone: J090077F02, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK101893.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J033070O21, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015765916.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group asparagine--tRNA ligase, cytoplasmic 3 (LOC4325717), mRNA | asparagine--tRNA ligase, cytoplasmic 3(LOC4325717) | coding protein | psRNATarget |