ncRNA ID | novel_zma_miR5510 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr7:29869172-29869363 [-] |
Reference genome | RefGen_v4 |
Source | SRR2638137;SRR2647221;SRR2647343;SRR2647385;SRR2647386;SRR2647387;SRR2647388;SRR2647389;SRR2647391;SRR2647467 |
Length | 22 |
Mature sequence(if miRNA) | 1 - AUCCUGUCUGUCCUGUAUGGUC - 22 |
Stem-loop(if miRNA) |
--   -    AA  A   G     C  GA  -GAAUC  U   -ACAA     ---GC    -     A   ------   ---G    --A   UAAA    GGGAA   CCA ACAG  GA AGA AGGGU CU  CU      GC GGC     UAGGA     CUGA AGCAG GGU      GGU    GUGC   GAC    CUGG     U   ||| ||||  || ||| ||||| ||  ||      || |||     |||||     |||| ||||| |||      |||    ||||   |||    ||||     C   GGU UGUC  CU UCU UCCUA GA  GA      CG UCG     GUCCU     GACU UCGUC CCG      CCG    UACG   UUG    GACC     G CU   A    --  G   G     A  --  AGUCGU  -   AAGAA     AGCCC    C     -   UAAGUA   AGAA    AUG   -UGA    ACAGA |
Stem-loop sequence | CCAACAGAAGAAAGAGAGGGUCCUGACUGAAUCGCUGGCACAAUAGGAGCCUGAAGCAGAGGUGGUGGUGCAGACUAAACUGGGGGAAUCGAGACACCAGAGUGUUGUAGCAUAAGAGCCAUGAAUGCCCUGCUCUCAGCCCGAUCCUGAAGAAGCUGCUGCUGAAGAGAAUCCUGUCUGUCCUGUAUGGUC |